Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3120 ATGGCGCCGGCGAAGAAAGGAAAAGCAAAGGCTGAAGCAAAGGAAACGGTTCCTTCGGAAAAACCTAATAATTTTCCGTCTTGTATTCGGTGTGTGGCTCCTTCTTCCGTCGCTATAACCATCCACGCTAAACCCGGTTCAAAGTCCGCTTCCGTAACAGATGTGAGCGATGAAGCTGTTGGTGTTCAGATTGATGCACCGGCGAGGGATGGTGAAGCAAATGCTGCTCTTCTTGATTATATCAGCTCTGTTTTAGGCGTAAAACGAAGACAAGTGTCTTTAGGAACCGGTTCTAAGTCAAGAGATAAGACGGTCATTGTGGAAGATGTAACTCAACAATATGTTTTTGACGCTTTGGATAAAGTCTCAAAACAGTAG 378 0.4471 MAPAKKGKAKAEAKETVPSEKPNNFPSCIRCVAPSSVAITIHAKPGSKSASVTDVSDEAVGVQIDAPARDGEANAALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDKVSKQ* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3120 125 SMART DUF167_2 33 109 IPR003746 -
Tpr3g3120 125 MobiDBLite consensus disorder prediction 1 25 - -
Tpr3g3120 125 Pfam Uncharacterised ACR, YggU family COG1872 37 108 IPR003746 -
Tpr3g3120 125 PANTHER OS04G0686300 PROTEIN 1 124 - -
Tpr3g3120 125 Coils Coil 119 125 - -
Tpr3g3120 125 SUPERFAMILY YggU-like 28 114 IPR036591 -
Tpr3g3120 125 Gene3D - 28 124 IPR036591 -
Tpr3g3120 125 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3120 K09131 - gmx:100527290 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3120 3 34311484 34312678 Tpr3g3120 3 34311484 34312678 ECH