Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3119 ATGGGAGCGTCAACTTCATCGGAGCCAAAGCTTTCTCCGGAACAACAGGAAGCGGAAAACGTCGCATCCACCACCGGAGCTCTTCCAATACTTCAGAAAGCTTTCTCCAAGTTCGCCAACTCCGAAACAAACGCAATTCCCTTAGAAAATCTACAAAAATGCTTTAGTTTCGTTCGCGAAGGTCGAAGTTACACTACCGAGAACGTAAACGATTCGTTTCCGGTGTTATTGGATCAATTAGGTTCATCTTTAGTTGATCAATTTTTTATTTCTGATAAAGGAGGAATAAACTGGGTTGAATTTGTGAAAGGTTATAACAAGTGTTGTTCTAGGGTTTCAGCATCGATTTTTTTAAACAAGTTTATTAGAGTGTTTATTGATGTTGCTAAAAAAGCGAATTTGTCTCTGAATTTGGAGTTTGAAACAGATGATGTTGATTGTAAGGTCAACGGTTACCTTCTTCCGAATCATGTGTTTCTGTTACTTTCCATTTGTTGGGCTATGTCTTGGGATTGTAGAAATTTGAAAGGGAAGGGAAATTTGAGTGTACCAGATTTGAGTCATTTGGTGTTATCAGCGGTTACGTCGTGTGTTGATGATAAAGATGGGTTTGATGTGTGGGATTGTGAGGTTTTGAGCTTGGAAGTTGAGATTCCTGTAGGGAAGTTTGTTACATGGGTTATCAGTACAGTGCCATGTCTCCCTGATTGCTTAAAGCAGTATTTTCATACAAGACTGCAAATTGCAGTAGCTGAAGGGGATGAATCGGCATCCTCTGATTCCTCTTCTGTTGGAGAAATTTCATCTACAACTGCATGCGATTCTATTTTAACCCAAGGAAGGGCGTGGGCAATTTCTATCACACAGAGAAGTACAATAAATGAAGAGATTTCTAGAGCCTTTATTAACAGTGGAGCTGGAATTGATGAGAACCTCATTTATCGTTCATCCACCCATGGAAGAGGCCTCAACAGATTTTGGTCTCATGTTGAAGGTTATCACGGTCCGTTGCTAATTTTGATTGCTGCAAGTTCAGGAAATGATCACGAAGGAAATTCTGCAATCAGGAAATTTGTTTTAGGTGCCCTAACAAACGAAGGTCTTGAAAATAAAGATATCTTCTATGGAACTGCCGGTTGTTTATATTCTTTAAGCCCGGTGTTTCATGTATTTCCACCATCTGGTAAGGAAAAAAATTTCGTTTATAGCCACTTGCATCCTACTGGAAGAGGATACCAATCACATCCAGCGCCAGTTGGAGTTGCATTTGGAGGAAGTGCGGGAAATGAGAGAATATTTATTGATGAAGATTTTTCAAAAGTGATCATTCGCCACCATGCTGTTGACAAAACTTACCAGAGCGGTGCCCTCTTTCCAGATCAGGGTTTCCTACCTACTGAAGCTCTCATTTCAGAAGTTGAAGTTTGGGGACTTGGTGGGAAAGCAGCAAAGGATGTTCAAAACAAATATAAGAAGAGAGAAGAACTTTTCACTGATCAAAGACGAAAAATTGACCTGAAGACATTTGCAAATTGGGAGGATTCACCTGAGAAAATGATGATGGATATGATGTCTGATCCAAATGCTGCACGAAGGGAAGAGCGTTGA 1608 0.4024 MGASTSSEPKLSPEQQEAENVASTTGALPILQKAFSKFANSETNAIPLENLQKCFSFVREGRSYTTENVNDSFPVLLDQLGSSLVDQFFISDKGGINWVEFVKGYNKCCSRVSASIFLNKFIRVFIDVAKKANLSLNLEFETDDVDCKVNGYLLPNHVFLLLSICWAMSWDCRNLKGKGNLSVPDLSHLVLSAVTSCVDDKDGFDVWDCEVLSLEVEIPVGKFVTWVISTVPCLPDCLKQYFHTRLQIAVAEGDESASSDSSSVGEISSTTACDSILTQGRAWAISITQRSTINEEISRAFINSGAGIDENLIYRSSTHGRGLNRFWSHVEGYHGPLLILIAASSGNDHEGNSAIRKFVLGALTNEGLENKDIFYGTAGCLYSLSPVFHVFPPSGKEKNFVYSHLHPTGRGYQSHPAPVGVAFGGSAGNERIFIDEDFSKVIIRHHAVDKTYQSGALFPDQGFLPTEALISEVEVWGLGGKAAKDVQNKYKKREELFTDQRRKIDLKTFANWEDSPEKMMMDMMSDPNAARREER* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3119 535 Pfam TLD 312 479 IPR006571 -
Tpr3g3119 535 ProSiteProfiles TLDc domain profile. 283 479 IPR006571 -
Tpr3g3119 535 SMART 109ultra 290 479 IPR006571 -
Tpr3g3119 535 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 522 - -
Tpr3g3119 535 MobiDBLite consensus disorder prediction 1 20 - -
Tpr3g3119 535 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 522 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3119 308 440 EF-hand Containing Proteins AT5G06260 26.471 3.11e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3119 - - gmx:100786867 831.632