Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3117 ATGGCATCTTCTAATACTCATACTGAAGCTGCAAAAACAGAACAAATAATCATAGAATTCTTCGCTAAAAGTCTTCATATTATAATCGAATCAAGAGCACTTTCTGCTTCATCACGTAATTTCAGCACCCTTTCTTCACCATCTTCAACTTCTTCATCATCATCATCAAGTGTTCGTCCTAGAGATAAATGGTTCAATCTAGCACTCAGAGAATGTCCTACAGCACTAGAAAACGCAGACCTATGGCGTCACAATAATCTTCAACCAATTGTAGTGGATATTGTTTTGATCCATAGAACCCACCAAAATCTTAGTTTTTCTCCAAAGGTTCGATCTTTTTTAAAAGATCGAAACCCCTTTGAAGAATTAGGAGTTGGGTGTTCACAGAATTCACAGAATTTACAGAATGAGAAGATTATTGAAAGATGGGTGATTCAATATGAAAGCAGAAAAATTAGGGATTGTTCTAATTCAAATGCTACTAGAAGATCAAGTAATACTTTTTTGCAGAATTTGTATAAGAAATCTACTTTACTTTTAAGATCTTTGTATGCTACTGTTAGAATTTTACCTGCTTATAAGATTTTCAAGGAACTTAATTCATCTGCAAATGTTTCTGCTTTTACACTTGTGCACCGTATTTCGACTTTTTTTGAACCATTTACTACTAAACAAGAATCTGAAATGCTGAAGTTTGTGTTTACTCCTGTGGATACTAATTCTGGTAGGCTATGTTTATCGGTAATGTATCGTCCGTGTGTTTCTGATGTGAGTTCTGAACCTTCAACTCCTTTGTCTCCACAAGTTATAACTGATTATGTTGGTAGTCCTATGACTGATCGGTTGATTCGGTTTCCGTCACTTCCTGTTGTTAGGGTGCCATCACATGATTCTTCTCCATCATCATTGCCATTTTTGAGGAGACATAGTTGGAGTTATGAAAATGGTAGAGCCTCACCTCCTTCGGTTAATTATTATTCGCCTTCGCCTACACATTCGGAATCACATACATTGGTGTCTAATGCTAGCTCTCCGTATTGCTATCCGCCCTCTAGTTTGCCTCCTCATCCAAGTGAAATGTCTTTGCTTCGGAAGAAGAATGCGAATTTCGATGATTACTATCCTTCGCCCAATTTCTCTCCTTCTCCCTCTCCTTCTTCATCATCTCCAATCTATAGTTTGGAGTCGTTAGCTTCGAAAACACTTTTACGCTCTGAAAGTGCTCCAGTAAACATACCTAATGCTGAAGTTGCTAATTCACCTGGACATACCAATAGGCATAATTTGCCTCCATCCACTCCCATTAGAATTTCGAGGTGTACTTCTGAGGCAGATAGAAGTAGGAATCTTATGCAATCTTGCTCAACAACTGAGAAGCTGTTTTCTCTTGGAAAAGATGAGTCTCACAAGTATTCTGGCGTCAAGATAGCACCTAACAGCTCGCCACAAGTTTCATTTTCCAGGAGCTCTAGCAGGTCTTATCAGGATGATTTTGATGAGACTGATTTTACTTGTCCTTTTGACGTGGATGATGACGATACGACAGATCCAGGCAGCAGAGCGGAATCTTTCGATCGCGGTGATATGACTCAACTGTTTGAAGCTGGTAGATTCCTTCCAATTAGAAAGTCTCAAGGTGCTGCTGTTGGTGCACTTGTTCATATGTTGAAGAAAGCAGCACCTCTACATCAAGACTTCTCCAGTTGTGAAAACTTGTCTCAGGGCACGCGTCCTGAAACCCGGAGGAGCAATGAAGTTCAAGAGCCTAACCAGATTCTAGAGACCCTAACACCAGCCAGTATAATGTCTTCTGGTAATAGGAAAACAACAAGTGATGCATTGGAAGAGTTTCATAGTTACAGAGAGATGAAAAACTTGTTACTTATGCCGCGCGGTGGTAGTAAGCGACAGACATAG 1917 0.3959 MASSNTHTEAAKTEQIIIEFFAKSLHIIIESRALSASSRNFSTLSSPSSTSSSSSSSVRPRDKWFNLALRECPTALENADLWRHNNLQPIVVDIVLIHRTHQNLSFSPKVRSFLKDRNPFEELGVGCSQNSQNLQNEKIIERWVIQYESRKIRDCSNSNATRRSSNTFLQNLYKKSTLLLRSLYATVRILPAYKIFKELNSSANVSAFTLVHRISTFFEPFTTKQESEMLKFVFTPVDTNSGRLCLSVMYRPCVSDVSSEPSTPLSPQVITDYVGSPMTDRLIRFPSLPVVRVPSHDSSPSSLPFLRRHSWSYENGRASPPSVNYYSPSPTHSESHTLVSNASSPYCYPPSSLPPHPSEMSLLRKKNANFDDYYPSPNFSPSPSPSSSSPIYSLESLASKTLLRSESAPVNIPNAEVANSPGHTNRHNLPPSTPIRISRCTSEADRSRNLMQSCSTTEKLFSLGKDESHKYSGVKIAPNSSPQVSFSRSSSRSYQDDFDETDFTCPFDVDDDDTTDPGSRAESFDRGDMTQLFEAGRFLPIRKSQGAAVGALVHMLKKAAPLHQDFSSCENLSQGTRPETRRSNEVQEPNQILETLTPASIMSSGNRKTTSDALEEFHSYREMKNLLLMPRGGSKRQT* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3117 638 Pfam Autophagy-related protein 13 18 253 IPR018731 GO:0006914|GO:1990316
Tpr3g3117 638 Gene3D HORMA domain 2 256 IPR036570 -
Tpr3g3117 638 PANTHER UNCHARACTERIZED 7 636 IPR040182 GO:0000045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3117 Tpr-Chr3 34290398 34297891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3117 K08331 - gmx:100816476 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3117 3 34290398 34297891 Tpr3g3117 3 34290398 34297891 ECH