Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3105 ATGATGCTACCAATTCTGCACCTCACCCTTTTGCCATTAATAATCTATCAAACAACCTTCTTTGTCTCTGCAATCGATCCCACAGTAGGGTTCACCTGTGTTCCATTAGATAGCTCACACTATGTTCTTCAAAAGCCTTATGATGTTTCATTAAACGAGCGTTACAGCTTTACAAATGGTGTGCACAAATTTTGGATATACTCCACAGATAAACCTTTCATGATGGGCAGCGATACACAACCACGAACGGAGATTCGTGTAACTGGATACGATTATACATCTGGTATAAGGCAATTTGAAGGATATGGTTATGTTCCGAGTGGCTCAACCGGGGTGTGTATTCAGCAAGTGTTCGGAGCAAGTTCTGCTGCGACAACCGCACAACTTAGGGTCTATAGTGGTTCATTAACTTATTATAGGTCTCCGGTTCTGTCGGCAAATATCTATGATAGGTGGTTTAGAGTGAACGTGATTCATGATGCAAATGCTAACAATGTTAAGGTTTATATTGATGGGGAACTCAAGTTTAATGGAGGTGATAATGGAGATGGCACTCACTACTTCAAGTTTGGGGTTTATGTACAGAATGATCCTTCCGGTTACATGGAATCTCGTTGGAAGGATATTAAAATTTGTAGAAAATAA 645 0.4016 MMLPILHLTLLPLIIYQTTFFVSAIDPTVGFTCVPLDSSHYVLQKPYDVSLNERYSFTNGVHKFWIYSTDKPFMMGSDTQPRTEIRVTGYDYTSGIRQFEGYGYVPSGSTGVCIQQVFGASSAATTAQLRVYSGSLTYYRSPVLSANIYDRWFRVNVIHDANANNVKVYIDGELKFNGGDNGDGTHYFKFGVYVQNDPSGYMESRWKDIKICRK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3105 214 PANTHER ALGINATE LYASE 13 214 - -
Tpr3g3105 214 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 13 214 - -
Tpr3g3105 214 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 203 IPR013320 -
Tpr3g3105 214 Pfam Alginate lyase 36 211 IPR014895 -
Tpr3g3105 214 Gene3D - 34 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3105 Tpr-Chr3 34168380 34169491 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3105 - - gmx:547636 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3105 3 34168380 34169491 Tpr3g3105 3 34168380 34169491 ECH