Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3104 ATGGCGTTGTTACAAATTTTGCACATGGCCCTTTTGCAAGTAATCATCTATCAAACCACACTTGCTTCAGCTATTGTCGATCCAACACAAGGGTTCACCCCTGTTTCATTAGATAACTCAAATTTTGTTATTCAAAAGCCTTATGATGTTCAAGAAAACCAACGTTACAGTTATACAAATGGAGTGCACCAATTTTGGGTATACCCTACAGACAAGCCTTTTAAGAATGACACTAATACTAAACCACGAACTGAGATTCGTATCAGTGGATATGATTATACATCTGGTATATGGCAATTTGAAGGGTATGGATATATTCCAAGCGGCACAAGTGGGGTGAGTATTATGCAAGTGTTCGGAGGAAGTCCTTATGCGACAACTGCAATGCTTAGGATATACGATGGTTCACTTACTTACTACGAGTCTCCGATTCTAACTCCAAATATCTATAATAGGTGGTTCAGAGTAAACGTGATTCATGATGTTGATGCTAACAATGTTAAGATTTATATCGATGGAGATCTAAAGTATGATGTAGCTGGTCGTGGAGCTAACACTCACTACTTCAAGTTTGGCGTTTACTTGCAGAACAATCCTTCCAACTGTACGGAATCTCGTTGGAAGTATATTAAAGTTTTTCAAAAATAG 648 0.3796 MALLQILHMALLQVIIYQTTLASAIVDPTQGFTPVSLDNSNFVIQKPYDVQENQRYSYTNGVHQFWVYPTDKPFKNDTNTKPRTEIRISGYDYTSGIWQFEGYGYIPSGTSGVSIMQVFGGSPYATTAMLRIYDGSLTYYESPILTPNIYNRWFRVNVIHDVDANNVKIYIDGDLKYDVAGRGANTHYFKFGVYLQNNPSNCTESRWKYIKVFQK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3104 215 Gene3D - 25 214 - -
Tpr3g3104 215 SUPERFAMILY Concanavalin A-like lectins/glucanases 37 202 IPR013320 -
Tpr3g3104 215 Pfam Alginate lyase 38 213 IPR014895 -
Tpr3g3104 215 PANTHER ALGINATE LYASE 6 215 - -
Tpr3g3104 215 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 6 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3104 Tpr-Chr3 34163892 34164998 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3104 - - gmx:547636 282.337