Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3055 ATGACTTCTACCGCAACCACCACTCTCTTCATCTATTCCCAATTCCAATCAAAATTCCCCAAACCACTTCTTCTTCCACCAATTCATATCTGCAACAAACCCCTATCACTTTCACTTCACTCATCCAAATTTCGTTCCACTCATTTATCACTCTGCACTTGTTCTCACACCCCATTAACACCCTCCAAAACTTTCTCACCTCAAACAACTTTTTCCAACTTCATTTCACAAAAGATAGCATTTTTTCTTATTGGGTCGTTTATTTTCATGGGTTGTTGTTTCAACCGAAGAATCGCTTTTGCAGTTTCAGTACCTTCTGTTGATTCTGCTGAAATTTTGAAAGAGAAGGAGAAGAAAACTGTAGAAGGGAAAAACAATGAGGATGAAATGAATGAGAGAGTTTTGGAGAATGATCCAAGAAATGTTGAGGCTGTTAAAGTGGTTGTGTATGGGAAACTTAGGAGAGGGAAATGTAAGGAAGCTGAGAAATTTATGAAGAAGCTGATTGATTTGGAACCAAATGAAGTTGAGTGGAGGCTTTTGCTTGCATTGTGTTATGAAACAATGGGGTATTTGAGTAAAGCTAAAAGAGTGTATTCAGAAATCTTGGAGACTAGGCCTCTTCTTGTTAGAGCTTTGCATGGTCTGGCTACGGTGATGAACAAAAACAACGAGGGTCCTGCTGCTGTGTTTGAAATGCTGAACAAGGCTCTAGAGTTAGCTATTAATGAAAACAAAGTTACAGAGGAAAGAAATATAAGAATCTTAACTGCACAAATGCTTGTTGTACAGGGTAACTTGGAGGAGGGCCTAAAAAGATGTCAAGATTTGATCGATCAAAATCCCCGCGATTTTAGACCTTATCTTTGCCAGGGAATAATATACAGTCTTCTGGATAAAAAGGAGGAAGCTGCACAGCAGTTTGAAACATATGAAGCTCTTGTGCCTAAAGAGTTTCCACAAAGGGGATTTCTTGATGATATCACCTTAGCAGCAAAAGGAACATCCCGAGTACAGTTTCAGAGGGAACTCGGAAATCAATTTTCTGACCAAAAAATAGGAAAATAA 1068 0.3876 MTSTATTTLFIYSQFQSKFPKPLLLPPIHICNKPLSLSLHSSKFRSTHLSLCTCSHTPLTPSKTFSPQTTFSNFISQKIAFFLIGSFIFMGCCFNRRIAFAVSVPSVDSAEILKEKEKKTVEGKNNEDEMNERVLENDPRNVEAVKVVVYGKLRRGKCKEAEKFMKKLIDLEPNEVEWRLLLALCYETMGYLSKAKRVYSEILETRPLLVRALHGLATVMNKNNEGPAAVFEMLNKALELAINENKVTEERNIRILTAQMLVVQGNLEEGLKRCQDLIDQNPRDFRPYLCQGIIYSLLDKKEEAAQQFETYEALVPKEFPQRGFLDDITLAAKGTSRVQFQRELGNQFSDQKIGK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3055 355 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 7 342 - -
Tpr3g3055 355 Gene3D Tetratricopeptide repeat domain 128 250 IPR011990 GO:0005515
Tpr3g3055 355 Gene3D Tetratricopeptide repeat domain 251 334 IPR011990 GO:0005515
Tpr3g3055 355 Coils Coil 231 251 - -
Tpr3g3055 355 Pfam Tetratricopeptide repeat 153 213 - -
Tpr3g3055 355 PANTHER OS05G0182100 PROTEIN 7 342 - -
Tpr3g3055 355 SUPERFAMILY TPR-like 154 317 IPR011990 GO:0005515
Tpr3g3055 355 Coils Coil 107 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3055 Tpr-Chr3 33055329 33058741 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3055 - - aprc:113852504 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3055 3 33055329 33058741 Tpr3g3055 3 33055329 33058741 ECH