Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3045 ATGGCTATGACTCTGAGTCTCAGCATCACAACAGTATCTTCCCCACGGTGGACCTCATCATCCATTCTCAAATTCAAACCCAATTCATCACCACTTTCATTCCCTCGTGCTTCTTCTTTTTCTACCACTTCCTTAACTCAACTCACCGTCGGTGAAGATTTACCGCCAAATTACGGTGATTGGCTTCCCAAACCCCAACTTCACCTTCGTAGAAGAGCTGGCATTCTACTCCATCCGACGTCGTTTCAAGGCCCCTACGGAATCGGCGATCTCGGAAATGAGACCTTTCGTTTCATTGACTGGCTCCATCAAACCGGTTGCTCCCTTTGGCAGGTTCTTCCTCTTGTGCCACCTGGTAGAAAGGCTAATGAAGAGGGATCTCCTTACTCAGGCCAGGATGCGAATTGTGGCAACACACTTTTGATTTCTCTTGAAGAGCTTGTTGAGGATGGATTGTTGGAAAAACACGAGCTTCCCAAACCAATTGATGCAGAGCGCGTGAATTTTTCGGTTGTTGCTGATCTTAAGGATCCTTTGATAACTAAGGCTGCAGAGAGGCTCATTTCAAGCAAAGGGGAGCTCAAAACGCAGCTTGAGAATTTTCGTAGGGATCCTAGCATATCAAGCTGGCTTGAAGATGCAGCTTACTTTGCTGCTATTGACGACAGTTTGAACACACTCAGCTGGTATGATTGGCCTGAACCTTTAAAAAACCGCCATATTGTAGCTCTAGAAGATATTTATGAACAAAAGCGAGATTTTATAAATGTATTTATTGCCCAACAGTTCTTGTTTCAAAGGCAATGGCAGAAAGTTCGTAACTATGCGCAGAGTAAGGGAATCAGAATAATGGGAGACATGCCCATTTACGTTGGTTATCATAGTGCAGATGTTTGGGCAAATAAGAACCAATTTGCACTGAACAGGAAAGGCTTTCCTCTTTTAGTGAGTGGCGTTCCTCCTGATGCATTCAGTGAAACTGGTCAGCTGTGGGGAAGCCCCCTGTATGATTGGAAAGCCATGGAAAAAGAAGGATACTCATGGTGGATACGCCGCATACGACGTGCACAAGATATATATGACGAATTTAGGCTTGACCATTTTAGAGGATTGGCTGGATTTTGGGCTGTTCCCTCTGAAGCAAAAGTAGCTATGGGTGGAAAGTGGAAGGTAGGACCTGGCACATCCTTCTTTGATGCCATTTCTAGAGCTGTTGGGAGCATTAATATCACAGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTGCAACTAAGAAAATCCATTGGAGCCCCTGGAATGGCTGTCCTCCAGTTTGGGTTTGGAGGTGGTGCTGATAACCCTCATTTGCCGCATAATCACGAGTGCAATCAAGTTGTCTATACAGGGACTCATGACAATGACACGATTCAGGGTTGGTGGGAAGCTTTAACCAAAGAAGAGAAATCCCATGTATTGAGTTATATTTCATTAACCAGAGAAGATGATATTCCGTGGGCACTAATCCAGACAGCTCTGGCCTCTGTTGCTCAAACAGCAATAATACCTATGCAAGATGTTCTTGGACTCGGGAGTTCTGCCAGGATGAATATTCCTGCAACTCAGTTTGGAAACTGGGGATGGAGGGTTCCAAGTTCTGTGAGCTTTGACAGGTTAGAGAGAGAGGCAACCAGACTTAAAGAGTTGCTTTCAATGTATGGTCGGCTTTGA 1710 0.4497 MAMTLSLSITTVSSPRWTSSSILKFKPNSSPLSFPRASSFSTTSLTQLTVGEDLPPNYGDWLPKPQLHLRRRAGILLHPTSFQGPYGIGDLGNETFRFIDWLHQTGCSLWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVEDGLLEKHELPKPIDAERVNFSVVADLKDPLITKAAERLISSKGELKTQLENFRRDPSISSWLEDAAYFAAIDDSLNTLSWYDWPEPLKNRHIVALEDIYEQKRDFINVFIAQQFLFQRQWQKVRNYAQSKGIRIMGDMPIYVGYHSADVWANKNQFALNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKEGYSWWIRRIRRAQDIYDEFRLDHFRGLAGFWAVPSEAKVAMGGKWKVGPGTSFFDAISRAVGSINITAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGGGADNPHLPHNHECNQVVYTGTHDNDTIQGWWEALTKEEKSHVLSYISLTREDDIPWALIQTALASVAQTAIIPMQDVLGLGSSARMNIPATQFGNWGWRVPSSVSFDRLEREATRLKELLSMYGRL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3045 569 Pfam 4-alpha-glucanotransferase 77 544 IPR003385 GO:0004134|GO:0005975
Tpr3g3045 569 Coils Coil 184 204 - -
Tpr3g3045 569 Gene3D Glycosidases 68 569 - -
Tpr3g3045 569 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 34 569 IPR003385 GO:0004134|GO:0005975
Tpr3g3045 569 SUPERFAMILY (Trans)glycosidases 51 568 IPR017853 -
Tpr3g3045 569 TIGRFAM malQ: 4-alpha-glucanotransferase 66 555 IPR003385 GO:0004134|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3045 Tpr-Chr3 32973324 32978891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3045 39 569 Glycoside Hydrolase AT5G64860 73.823 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3045 K00705 - gmx:100795007 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g3045 3 32973324 32978891 Tpr3g3045 3 32973324 32978891 ECH