Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g3021 ATGGCGAAGAATAATACTGTTTTTCTTCACTTCTTCATCATTCTCTTCCTTTCTATTTCCTCACTTTCGGTTTCAGCAGCAAGAATTGTGCCTCTCTTGCAAAATTACGGAAAACCCTTTTTCAGATCAAATTTTCATAATATTTATGACACTTCAAACTATGGTGTTTTTCAGCTCAGTAATGGATTGGCTCTCACTCCTCAGATGGGATGGAACAGCTGGAACTTCTTTGCATGCAATATAAATGAAACAGTTATTAAGGAAACAGCTGATGCACTGATATCAACTGGATTGGCTAAGTTAGGCTATGATTACGTCAATATAGATGACTGCTGGTCTTCTGTGACAAGAAATTTGAAGGGTGACCTTGTCCCTGATCCTAAGACATTTCCGTCAGGAATTAAAGCACTTGCAGATTATGTGCATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCAGGGGTTTTTACATGTCAAGTTCGACCAGGATCTATTTTCCACGAACATGATGATGCAGATTTATTTGCCTCTTGGGGCGTAGATTATTTGAAATACGACAATTGTTACAATCTGGGCATCCCTCCAAAAAAACGATATCCACCTATGCGCGATGCCCTCAATGAAACGGGACGTAAAATTTTCTATTCAATCTGTGAATGGGGTGTTGACGATCCTGCTTTATGGGCAGGCAAGGTTGGTAACAGTTGGCGAACAACCGATGACATCAATGATACGTGGGCAAGCATGACAACTATTGCTGATCTTAATGACAAGTGGGCTTCATATGCGGGTCCTGGAGGATGGAACGACCCAGATATGTTGGAAGTTGGCAATGGTGGCATGACTTACCAGGAATACCGTGCTCACTTCAGCATCTGGGCTTTAGCTAAGGCTCCTCTATTGATTGGTTGCGATGTAAGAAATATGACTGCTGAAACACTTGAGATTTTAACCAATAAAGAAGTCATTGCTATAAATCAAGACTCACTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAATAGATGGTTGCAGTCAGGTATGGGCAGGTCCTTTATCAGGAAATCGTTTGGCCGTTGCTCTATGGAATCGATGCTCAAAAGCTGCCAATATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGAATTCATGTTTCTGTTAGGGATTTGTGGCAGCACAAGGTAATAAATGGAGCTGCAGTGTCATCAATCAGTGCTCAAGTTGATTCTCATGCTTCACAGTTGTACATTTTGACTCCATCTACAGCATCTTATTCTGTATAG 1293 0.4153 MAKNNTVFLHFFIILFLSISSLSVSAARIVPLLQNYGKPFFRSNFHNIYDTSNYGVFQLSNGLALTPQMGWNSWNFFACNINETVIKETADALISTGLAKLGYDYVNIDDCWSSVTRNLKGDLVPDPKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHEHDDADLFASWGVDYLKYDNCYNLGIPPKKRYPPMRDALNETGRKIFYSICEWGVDDPALWAGKVGNSWRTTDDINDTWASMTTIADLNDKWASYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNMTAETLEILTNKEVIAINQDSLGVQGRKVQVSGIDGCSQVWAGPLSGNRLAVALWNRCSKAANITASWEALGLESGIHVSVRDLWQHKVINGAAVSSISAQVDSHASQLYILTPSTASYSV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g3021 430 CDD GH27 67 329 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 SUPERFAMILY Glycosyl hydrolase domain 331 423 - -
Tpr3g3021 430 PANTHER ALPHA-GALACTOSIDASE 3 43 422 - -
Tpr3g3021 430 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 43 422 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 Pfam Alpha galactosidase C-terminal beta sandwich domain 345 421 IPR041233 -
Tpr3g3021 430 Gene3D - 332 424 IPR013780 -
Tpr3g3021 430 SUPERFAMILY (Trans)glycosidases 59 329 IPR017853 -
Tpr3g3021 430 Pfam Alpha galactosidase A 66 329 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 ProSitePatterns Alpha-galactosidase signature. 102 118 IPR000111 GO:0004553|GO:0005975
Tpr3g3021 430 Gene3D Aldolase class I 59 331 IPR013785 -
Tpr3g3021 430 PRINTS Glycosyl hydrolase family 27 signature 61 80 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 PRINTS Glycosyl hydrolase family 27 signature 97 112 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 PRINTS Glycosyl hydrolase family 27 signature 138 159 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 PRINTS Glycosyl hydrolase family 27 signature 172 189 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 PRINTS Glycosyl hydrolase family 27 signature 199 217 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 PRINTS Glycosyl hydrolase family 27 signature 264 283 IPR002241 GO:0004553|GO:0005975
Tpr3g3021 430 PRINTS Glycosyl hydrolase family 27 signature 285 306 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g3021 Tpr-Chr3 32649344 32654440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g3021 3 429 Glycoside Hydrolase AT3G56310 69.393 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g3021 K07407 - gmx:100784072 764.992