Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2896 ATGATAACTTTAACTGATTTCTACCATGTGATGACAGCAATGGTGCCACTTTATGTTGCTATGATCTTAGCTTATGGTTCTGTAAAATGGTGGAAAATATTCTCACCTGATCAATGTTCAGGAATCAACCGTTTTGTAGCACTATTTGCAGTTCCACTTCTTTCATTCCATTTCATAGCATCAAACAATCCTTACAAAATGAACCTTAGGTTCTTAGCAGCTGATACACTCCAAAAGCTCATAATTTTATCACTTCTTGCAATTTGGAGCAATTTTTCCAAAAGGGGTTGTTTGGAATGGACAATAACACTTTTTTCACTCTCAACTTTACCAAACACTTTGGTTATGGGTATCCCTTTACTGAAAGGAATGTATGGTGATTTTTCAGGTAGTTTAATGGTACAAATTGTTGTTCTTCAATGTATCATTTGGTATACTTTGATGCTTTTCATGTTTGAGTTTAGAGGAGCAAGATTGTTGATTTCAGAACAGTTTCCAGATACTGCTGGTTCTATTGTTTCAATCCATGTTGATTCTGATGTCATGTCATTGGATGGTAGAACACCATTGGAAACTGATGCTGAAATCAAACAAGATGGTAAACTTCATGTTACTGTTAGAAAATCAAATGCTTCAAGATCAGATATTTACTCAAGAAGATCACAAGGTCTTTCTTCAAATACTCCTAGGCCTTCTAATCTTACTAATGCTGAGATTTACTCTCTTCAATCTTCTAGAAATCCTACACCAAGAGGGTCTAGTTTTAATCATACTGATTTTTACTCTATGATGGGTGTGGGTGCTGCTGCTGGTGGTAGAAATTCTAATTTTGGTTCTAATGATCTTGTTAATTATGGTTTATCTGCTAATTCAAGAGGTGTTACTCCAAGACCTTCTAATTATGAAGAAGATGCTGTTGCTGCTAATAATAATGCTAAGAAATTCAAAAATTACCCTGCACCTAATCCAGGAATGTTTTCACCTACTAATAATAATAATAATAATAACAAAAATGTTGTTAATGTTAAGAAGAGTCAAAATGGTCAAACTCAAATTCAACAGAAACAAGAAGATCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCTGTTTCTGATGTATTTGGTGGACATGAATTTGGTGCTCATGATCAGAATCAGAAAGAAGTTAAATTGAATGTATCTCCTGGAAAAGTAGAGGGTCATAGAGAAACTCAAGAGGACTACATGGAGAAAGATGAATTCAGCTTTGGAAATAGAGGAATGGAAAGGGAAATGAATCAACTTGAAGGTGAGAAAGTTGGAGATGGAAAATCAAAAGTTATGCCACCAGCTAGTGTTATGACAAGGCTTATATTGATTATGGTTTGGAGAAAACTTATCAGAAATCCAAACACTTACTCAAGCTTAATTGGTCTCACTTGGTCTCTAGTTTCATTTAGGTGGAATATTGAGATGCCTGCCATTATAGCAAAGTCTATTTCTATTCTGTCAGATGCAGGCCTTGGCATGGCCATGTTCAGTCTTGGTTTGTTTATGGCTTTGCAACCAAAAATCATAGCATGTGGAAATTCCATAGCAGCTTTTTCTATGGCTGTGAGATTCCTTACAGGTCCAGCTGTAATGGCAGCTGCTTCACTTGCTGTTGGACTCAAAGGTGTTCTCTTTCATGTTGCAATTGTGCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCTAAGGAATATAATGTACATCCTGATATTCTAAGCACAGGTGTCATTTTTGGAATGTTGATTGCTTTGCCCATTACTCTTGTGTACTACATCTTAATGGGGCTATGA 1830 0.3617 MITLTDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYKMNLRFLAADTLQKLIILSLLAIWSNFSKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARLLISEQFPDTAGSIVSIHVDSDVMSLDGRTPLETDAEIKQDGKLHVTVRKSNASRSDIYSRRSQGLSSNTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMGVGAAAGGRNSNFGSNDLVNYGLSANSRGVTPRPSNYEEDAVAANNNAKKFKNYPAPNPGMFSPTNNNNNNNKNVVNVKKSQNGQTQIQQKQEDLHMFVWSSSASPVSDVFGGHEFGAHDQNQKEVKLNVSPGKVEGHRETQEDYMEKDEFSFGNRGMEREMNQLEGEKVGDGKSKVMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFRWNIEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPKIIACGNSIAAFSMAVRFLTGPAVMAAASLAVGLKGVLFHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILMGL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2896 609 Pfam Membrane transport protein 9 604 IPR004776 GO:0016021|GO:0055085
Tpr3g2896 609 TIGRFAM 2a69: auxin efflux carrier 1 609 IPR014024 -
Tpr3g2896 609 MobiDBLite consensus disorder prediction 212 234 - -
Tpr3g2896 609 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 609 - -
Tpr3g2896 609 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2896 Tpr-Chr3 30601283 30606807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2896 1 600 Organic Solute Cotransporters AT1G73590 71.248 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2896 K13947 - gmx:100499637 1026.16