Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2888 ATGTTTGGGAGCTGGGTGGACTCATATCATGCTCTTCCGCAGTGGTTGATGACAATGCAACATTATCTTCCAAATGTCGTCACAATATTAGAGACCCTACCGGCAGACACTCCTGATGATGTGACCTTCCATCGTCTGTTTTGGTCTTTTGAACCACTTATTAAAGGTTTTGCATATTGTAAACCAATTGTGCAGGTTGATGGAACATGGTTATATGGGAAGTATAAAGGGACATTGTTGCTAGCTGTTGCACAAGACGAAAATGACCATATATTTCCAGTCGCTTTTGCAATTGTGGAAGGTGAAACAAAGGAAGCTTGGAACTTCTTTTTAAAAAATTTGAGAACATATGTCACTCCACAACAACATCTTTGTGTGATTTCAGATAGACATCCATCCATTAAAAGTGCTTATGATAATCCTGCAAATGGTTGGAATGATCCTACCTGCAGACATGTGTACTGCATCAGACACATTGCCCAAAACTTCATGCGAAAGTTCAACAATAAAAAGCTTCGCAAGTTGGTTGTTAACATGGGATTTGCAGTAAATCAACCTTTGCACAGATACTACCGCAGCAAAATTGCTGCGCAGAACACTAATGCAATAGGGTGGCTTGATAATATCCCCATAGCGAAGTGGACGCAAGCATTCGATGAAGGTCGTCGGTGGGGTCATATGACAACCAACCTTGCTGAGTCGATGAACAACGTGTTTAAGGGTATTCGCAATGAACCCATCACAGCTTTGGTCCAATCAACGTTCTATAAGTGTGTCGTACTGTTTCAAAGAAGAGCCACTGAATCAGCAGCTGTGTTGCAATCTGGACAACAATATTCAGAAGCTTGTCAGAAACGGATTAAAGAAGCAATGCATAAAGCAAACTCACATCAAGTCATTGCTTTTGATCGACTCAATCAAACTTTCAGGGTAATGGAAACTGTCAATCACAACGAGGGTCGACCAATGGGTCGATTTCTGCTCAAGTTGGGTGAAAGCTGCTGTGATTGTGGAGAATTTCAAGCTTTACATTTGCCTTGTTCGCATGTTATTGCTGCATGCTCCCATGCTACACAAGCTTATCAAGTTCATATACATGACGTGTACAAAGCTGCAAGTGTATTTTGTGTTTACAATAACACCTTCCCGGGAATTCAAGACCAATCATATTGGCCCCAATATTATGGCCGTCGACTTTGCCCCGACCCAGCAATGAAAAGATGTAAGAGAGGTCGTCCGAAAAGTACGCGCATTAGGACGGAAATGGACGACGAGATCGAAACTTTGAATAAGTGTGCTTTATGTAGGGTGCCGGGCCATGATCGTAGGAATTGTCCAAATTCCAATTAA 1350 0.42 MFGSWVDSYHALPQWLMTMQHYLPNVVTILETLPADTPDDVTFHRLFWSFEPLIKGFAYCKPIVQVDGTWLYGKYKGTLLLAVAQDENDHIFPVAFAIVEGETKEAWNFFLKNLRTYVTPQQHLCVISDRHPSIKSAYDNPANGWNDPTCRHVYCIRHIAQNFMRKFNNKKLRKLVVNMGFAVNQPLHRYYRSKIAAQNTNAIGWLDNIPIAKWTQAFDEGRRWGHMTTNLAESMNNVFKGIRNEPITALVQSTFYKCVVLFQRRATESAAVLQSGQQYSEACQKRIKEAMHKANSHQVIAFDRLNQTFRVMETVNHNEGRPMGRFLLKLGESCCDCGEFQALHLPCSHVIAACSHATQAYQVHIHDVYKAASVFCVYNNTFPGIQDQSYWPQYYGRRLCPDPAMKRCKRGRPKSTRIRTEMDDEIETLNKCALCRVPGHDRRNCPNSN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2888 449 PANTHER POLYPROTEIN, PUTATIVE-RELATED 3 226 - -
Tpr3g2888 449 SMART 26again6 333 360 IPR006564 GO:0008270
Tpr3g2888 449 ProSiteProfiles Zinc finger SWIM-type profile. 326 358 IPR007527 GO:0008270
Tpr3g2888 449 Pfam SWIM zinc finger 328 357 IPR007527 GO:0008270
Tpr3g2888 449 PANTHER - 3 226 - -
Tpr3g2888 449 Pfam MULE transposase domain 63 162 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2888 Tpr-Chr3 30529998 30531435 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2888 - - cam:105852965 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2888 3 30529998 30531435 Tpr3g2888 3 30529998 30531435 ECH