Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2883 ATGAAGGAGCCGTTGTTGTGGGGGAGAGAAGAGAAGAGTGGGAACAAAAGAGGGAAAGTGAATTTGGAAGGGTTGTTGATGACGATGATGAGTAACAATAAAGTTGACAAGTTGAAGAATACCATGTCGGTTAGGTCGTCGAGGATGAATTTGTGGATGATAAGGGCTACAACATCGGTGATATTGTGGATTTGTATTGTTCAGTTAACTGCATTTGGTGATATGTGGGGTCCTAGAGTTTTGAAAGGTTGGCCTTCTTGTTTTACACATGAATCTGCAATCATGGAGTTTCCTTCTACGGTTCCCAGAGTTCTTCCACCCAAGAGAGTTTATAAAAACAATGGTTACTTGATGGTGTCCTGCAATGGAGGATTGAATCAAATGAGAGCAGCGATATGTGATATGGTGGTAATTGCAAGATATTTAAATGTCACACTTATAGTCCCTGAATTGGATAAAGCTTCCTTTTGGGCTGATCCCAGTGAGTTCCAAGACATATTTGATTTGGATCATTTTATTACATCTTTGAGAGATGAAGTGCGGATATTGAGAGAGTTGCCTCCTAGACTCAAGCATAAAGTGGAAAATGGGTTTCTTTACAGCATGCCACCGATTAGTTGGTCTGATATGTCGTACTATAAGAACCAGATTCTGCCACTAATACAAAAGTATAAAGTTGTCCATTTGAATCGAACTGATGCTCGGCTGGCCAATAATGGGCAATCTTTAGAGATTCAGAAGCTGCGTTGCCGAGTCAATTTTAGTGCTCTTAGATTTACTCCTCAGATTGAGGAGTTAGGAAGAAAGGTGATCAATCTTCTGAGGAAAAATGGTCCATTTCTGGTTCTTCATCTGCGGTATGAGATGGACATGTTGGCATTTTCCGGCTGTACTCAAGGTTGCAACAGTGATGAGGTGGATGAATTGACAAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATCAATTCTGATTTGAAAAGAAAAGATGGTTTGTGTCCGTTAACGCCTGAGGAGACTGCCCTTGCGCTTAGGGCCTTTGACATTGATCAAAACATTCAAATTTATATTGCAGCTGGGGAAATATATGGTGGGAGTAGGAGAATGGCCAGTCTAGCAAAGAGCTATCCAAATTTGGTCAGAAAAGAAACACTGTTGGAACCATCTGAACTTCAGTTCTTCCAAAACCATTCCTCTCAAATGGCAGCATTGGATTATCTTGTCTCATTAGAGAGCGATATATTTGTTCCTACATATGATGGAAATATGGCCAAAGTAGTTGAAGGCCATCGCAGATACCTTGGGTTCAAAAAAACCATTTTATTGAACAGAAAGCTCCTAGTTGAGTTGATAGATCAATACACCAATGGAGCATTGAGCTGGGACCAATTCTCTTCAGCTGTGAAGCAATCTCATGCAGATCGCATGGGCAGCGCAACAAAAAGATTGGCAATCCCTGATAGGCCAAAAGAAGAGGATTATTTCTATTCCAATCCAGAGGAATGTTTAGAATCATCAGAAGACAATATGTTGAGTAGTACAGCTTGA 1554 0.4048 MKEPLLWGREEKSGNKRGKVNLEGLLMTMMSNNKVDKLKNTMSVRSSRMNLWMIRATTSVILWICIVQLTAFGDMWGPRVLKGWPSCFTHESAIMEFPSTVPRVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVVIARYLNVTLIVPELDKASFWADPSEFQDIFDLDHFITSLRDEVRILRELPPRLKHKVENGFLYSMPPISWSDMSYYKNQILPLIQKYKVVHLNRTDARLANNGQSLEIQKLRCRVNFSALRFTPQIEELGRKVINLLRKNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVDELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALALRAFDIDQNIQIYIAAGEIYGGSRRMASLAKSYPNLVRKETLLEPSELQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLNRKLLVELIDQYTNGALSWDQFSSAVKQSHADRMGSATKRLAIPDRPKEEDYFYSNPEECLESSEDNMLSSTA* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2883 517 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 37 510 - -
Tpr3g2883 517 PIRSF UCP009360 14 502 IPR024709 -
Tpr3g2883 517 CDD O-FucT_plant 116 441 IPR024709 -
Tpr3g2883 517 Pfam GDP-fucose protein O-fucosyltransferase 116 436 IPR019378 -
Tpr3g2883 517 PANTHER OS02G0726500 PROTEIN-RELATED 37 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2883 Tpr-Chr3 30359753 30363688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2883 112 515 Miscellaneous Gene Families AT2G37980 48.529 7.57e-132 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2883 K23280 - gmx:100778901 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2883 3 30359753 30363688 Tpr3g2883 3 30359753 30363688 ECH