Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2877 ATGTCGACGCTACTTCTACCCACACCTCCTCACCTCGGCTCAGTTTACCGACGCAACACTTTATCACAATCATCATCATCATCTTCTTCTTCTTATTCTTCTACTTTCTCACTTCAATTTCACCCTCGATTCTCTTTTTCTTCTTTTCCCCAAACGCGTACAAGAAGATGCATTTCCCCTCGCGCTTTCGATTCTTCCTCCGACTCCAAAATTGAAGAAGAAAAGGAAAGTGAAAAAATTAGAATCGCTGATGAGGATTATCCTAGTGGTGAGTTCGAATTTAAACCTATTACTGGATGGAGGAAATTTCTTGTTCAGGTTAAGATGTTGTTTGCGTTTCCATGGGAACGTGTTCGTAAAGGCAGTGTCCTTACAATGAAGCTTCGTGGCGAGATATCTGATCAAGTGAAGAATAGGTTCTCTTTGGGACTTTCTCTACCACAGATTTGCGAGAATTTTTTGAAAGCAGCCTACGATCCTCGCATTTCTGGGATCTATCTCAATATTGATGGTTTAAACTGTGGGTGGGGTAAAGTTGAAGAAATTCGAAGGCACATATTGAATTTCAAAAAATCAGGGAAATTTGTTGTGGCTTATGTTCCTACATTTCAAGAAAAAGAATATTACCTTGCGTGTGCATGTGAAGAGATATATGCCCCTCCTAGTGCTTACTTTACTTTGTTTGGATTTAGTGTTGAAGCCTCATTCCTCAGAGGTGTTTTTGATAAAATAGGAGTTGAACCGCAGGTAGAAAGGATTGGCAAGTACAAAAGTGTTGGAGATCAATTAGCTCGAACGACCATGTCTGATGAAAATTGTGAGATGTTGACTGCTTTGCTTGATACCATCTATACAAACTGGCTGGATAAAGTCTCTTCTGCCAAAGGAAAGGGTAGAGAAGATATTGAGAACTTCATAAATGAAGGTGTTTATGAAGTTGATAAGCTGAAAGAAGAGGGCCTTATATCAAATGTAATATATGATGATGAGGTTACTGCCATGCTGAAGGAGAGACTTGGAGTGAAAGCCGAAGACGAACTGCCTACGGTAGATTACAGGAAATACTCTCGTGTTAGGAAATGGACAGTTGGAATATCAGGTGGCAAAGAACAGATAGCCATCATCCGGGCGTCAGGGAGCATTAGTCGAGTTAAGAGTCAGTTAAGTTTTTCTAGCTCAGGGATTGTTGCAGAGGAGTTCATTGAGCAGATTCGCACCGTGAGAGAGTCAGAAAAATTTAAGGCCGCTATTATCAGAATTGACAGTCCTGGAGGTGACGCTCTTGCCTCTGATTTGATGTGGAGGGAAATTCGGCTTTTAGCTGCTTCAAAACCAGTTATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAACTGATGCTATTGTTGCCGAAAGTCTTACCATAACTGGTTCAATTGGAGTGGTCACAGGAAAGTTTAACCTTGGGAAACTGTATGAGAAAATTGGCTTTAATAAAGAAATTATATCAAGGGGAAGATATGCTGAGGTCATGGCTGCTGACCAGCGTTCTTTTAGACCAGATGAAGCAGAGCTATTTGCAAAATCCGCACAGAGTTCTTATAAAGGATTTCGAGACAAGGCAGCTTTATCCAGATCAATGACTGTGGAAAAGATGGAGGAGGTAGCACAGGGGAGGGTTTGGATTGGTAAAGATGCGGCATCACATGGCTTGGTTGATGCTATTGGTGGTCTTTCTCGAGCTATTGCCATAGCAAAATTGAAGGCCAACATACCTCAAGACCAACAGGTTACTGTTGTGGAGATATCCGCATCAAGTTCCTCTCTACCTGGAGTTTTATTTAACGGAGTGAGTTCCCTAACTGGAGTCGTAAACATGTTGAAGGAGCTGCTACAGGGGTTGACATTTTCTGATGGAGTTCAAGCCAGGATGGATGGAATCATATTTCGTTCAGTGGAAGGTTATCCTAACGCTAACTCCATTTTGTCAATTATAAAAGACTATATTAGTACCCTGTAG 2019 0.4156 MSTLLLPTPPHLGSVYRRNTLSQSSSSSSSSYSSTFSLQFHPRFSFSSFPQTRTRRCISPRAFDSSSDSKIEEEKESEKIRIADEDYPSGEFEFKPITGWRKFLVQVKMLFAFPWERVRKGSVLTMKLRGEISDQVKNRFSLGLSLPQICENFLKAAYDPRISGIYLNIDGLNCGWGKVEEIRRHILNFKKSGKFVVAYVPTFQEKEYYLACACEEIYAPPSAYFTLFGFSVEASFLRGVFDKIGVEPQVERIGKYKSVGDQLARTTMSDENCEMLTALLDTIYTNWLDKVSSAKGKGREDIENFINEGVYEVDKLKEEGLISNVIYDDEVTAMLKERLGVKAEDELPTVDYRKYSRVRKWTVGISGGKEQIAIIRASGSISRVKSQLSFSSSGIVAEEFIEQIRTVRESEKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGTDAIVAESLTITGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAEVMAADQRSFRPDEAELFAKSAQSSYKGFRDKAALSRSMTVEKMEEVAQGRVWIGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDQQVTVVEISASSSSLPGVLFNGVSSLTGVVNMLKELLQGLTFSDGVQARMDGIIFRSVEGYPNANSILSIIKDYISTL* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2877 672 PIRSF Protease_4_SppA 64 672 IPR004634 GO:0006465|GO:0008233|GO:0016021
Tpr3g2877 672 PANTHER PROTEASE 4 54 671 - -
Tpr3g2877 672 Gene3D - 518 638 - -
Tpr3g2877 672 Gene3D - 262 357 - -
Tpr3g2877 672 Gene3D - 121 260 - -
Tpr3g2877 672 CDD S49_Sppa_N_C 371 586 IPR002142 GO:0006508|GO:0008233
Tpr3g2877 672 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 372 585 IPR004635 GO:0006508|GO:0008233
Tpr3g2877 672 SUPERFAMILY ClpP/crotonase 112 330 IPR029045 -
Tpr3g2877 672 CDD S49_SppA_67K_type 124 337 - -
Tpr3g2877 672 Gene3D - 367 517 - -
Tpr3g2877 672 SUPERFAMILY ClpP/crotonase 362 577 IPR029045 -
Tpr3g2877 672 Pfam Peptidase family S49 440 590 IPR002142 GO:0006508|GO:0008233
Tpr3g2877 672 Pfam Peptidase family S49 189 341 IPR002142 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2877 Tpr-Chr3 30289238 30299856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2877 K04773 - gmx:100781522 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2877 3 30289238 30299856 Tpr3g2877 3 30289238 30299856 ECH