Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2848 ATGTTCCGCATAAGCAACACATTGGTTGGTACCTTAAACATACTAACCTTATTGTTATCACTCTCTGCCTTGGGTGGTTCTGCCTACATTCACTTCCACAAAACCGACTGCCTCAAAGTGTTGATGTATCCTCTCCTCTTCGGCGCCGTCTTCATTTTCGTCGTATCGGTTCTCGGAATAACTGGTTCAATGTTCCGTATTAATGAGGCTCTATATGCATACCTTCTTGCCACTTTCTTTATTATACTGGGCTTCATGTTGTTTACTGTTTTTGCATTGTTTGTCACTAATGGTCAAAAGTTGTCTCATAAAGGAATTCGGGAGTATAGAGTTGCGGATTTTTCCCTTTGGTTGCAACAATATGTTATTAATGACAAAAATTGGAATGATATTAAGACTTGTTTGGTGGGTGTAGGTTTCTGTCAACGGAATCACTCCGTAGTCGCGCAGATTGGATGTTGTAAACCACCTTTGCAATGTGGATTCACAATGAAAAATGCAACATTCTGGGAAGTACCGAAAACAGGTCCATTAGTGAACGATACAGATTGCAGGACATGGAAAAATAGGCAGGACAAGCTATGTTACGATTGCAATTCATGCAAAGGAGAAGTGCTTGCCAACATAAGGAACCAATGGAGATATCTCACTATATTCAATGTTTGTGTGCTTATACTTCTCACTACCATATATGTCTTAGGTTGCTATGCCATCAGGAACAATCGAATAGACCAACATTTGGAGTACCATCCATACGGAATCACCCATTATATATAA 777 0.3977 MFRISNTLVGTLNILTLLLSLSALGGSAYIHFHKTDCLKVLMYPLLFGAVFIFVVSVLGITGSMFRINEALYAYLLATFFIILGFMLFTVFALFVTNGQKLSHKGIREYRVADFSLWLQQYVINDKNWNDIKTCLVGVGFCQRNHSVVAQIGCCKPPLQCGFTMKNATFWEVPKTGPLVNDTDCRTWKNRQDKLCYDCNSCKGEVLANIRNQWRYLTIFNVCVLILLTTIYVLGCYAIRNNRIDQHLEYHPYGITHYI* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2848 258 PANTHER TETRASPANIN-8 1 246 - -
Tpr3g2848 258 Pfam Tetraspanin family 6 235 IPR018499 GO:0016021
Tpr3g2848 258 PANTHER TETRASPANIN-8-RELATED 1 246 IPR044991 GO:0009734|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2848 Tpr-Chr3 29783798 29784967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2848 1 248 Miscellaneous Gene Families AT1G18520 42.593 1.09e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2848 - - gmx:100815322 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2848 3 29783798 29784967 Tpr3g2848 3 29783798 29784967 ECH