Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2810 ATGGGTTGGGTTTCAGACACAGTGGACTCCATCAAGTCCATTAAAGTCAGAGAAGTTTTGCACCAACTCATTGTTCTTGGGATGATTGTAACAACGGCACTAATTATATGGAAAGGGTTAATGTGTATTACTGGAACTGAATCACCAGTTGTTGTTGTTCTTTCCGGAAGCATGGAACCTGGTTTCCAAAGAGGTGACATTTTGTTCTTGACTATGAGCAAGGATCCTATTCGTTCAGGAGACATTGTGGTTTTCAATATAGATGGACGTGATATTCCAATTGTTCACCGTGTAATTAAGGTCCACGAACGTGAAGATACAGAAGACAAGTATTACCTTACTAAAGGAGACAATAATCCTATGGATGACAGGGTTTTGTACAATCATGGCCAGAATTGGTTGGAGAAAAAGCATATTATGGGAAGAGCTGTCGGGTTTGTACCTTATGCTGGTTGGGCTACAATAATTATGTCTGAAAAGCCTATTATCAAGTATGTACTCGTAGGGGCATTGGGACTGCTGGTTTTGACAACAAAGGAATAG 543 0.4033 MGWVSDTVDSIKSIKVREVLHQLIVLGMIVTTALIIWKGLMCITGTESPVVVVLSGSMEPGFQRGDILFLTMSKDPIRSGDIVVFNIDGRDIPIVHRVIKVHEREDTEDKYYLTKGDNNPMDDRVLYNHGQNWLEKKHIMGRAVGFVPYAGWATIIMSEKPIIKYVLVGALGLLVLTTKE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2810 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 53 68 IPR001733 GO:0006465|GO:0008233|GO:0016020
Tpr3g2810 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 112 123 IPR001733 GO:0006465|GO:0008233|GO:0016020
Tpr3g2810 180 SUPERFAMILY LexA/Signal peptidase 35 146 IPR036286 -
Tpr3g2810 180 Gene3D Umud Fragment, subunit A 48 158 - -
Tpr3g2810 180 CDD S26_SPase_I 49 143 IPR019533 GO:0004252|GO:0006465
Tpr3g2810 180 TIGRFAM sigpep_I_arch: signal peptidase I 23 175 IPR001733 GO:0006465|GO:0008233|GO:0016020
Tpr3g2810 180 PANTHER SIGNAL PEPTIDASE I 1 180 - -
Tpr3g2810 180 PANTHER SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 1 180 IPR001733 GO:0006465|GO:0008233|GO:0016020
Tpr3g2810 180 Pfam Peptidase S24-like 37 144 IPR015927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2810 Tpr-Chr3 29168550 29174454 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2810 K13280 - dcr:108220986 286.96