Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2773 ATGATGAGAATCGCAGTAGCGTGCGCAAAGAGACTTGTTGGAACGGCGTCGTTTGAGACACAAGTTCCGGCAATTAGGGTTCTTCCACGATTCTACCACGAGAGGGTTGTCGATCATTACGATAATCCCCGGAATGTTGGATCCTTCGATAAGAACGATCCTACGATAGGAACTGGTCTTGTTGGAGCACCCGCTTGTGGCGATGTTATGAAGCTTCAGATTAAGGTTGATGAGAAAACCGGAAAAATCATCGATGCTCGCTTTAAGACCTTTGGCTGTGGTTCCGCCATTGCTTCTTCCTCCGTCGCTACTGAATGGGTTAAGGGAAAGCAAATGGAGGAGGTTTTAACTATTAAGAACACTGAAATTGCAAAGCATCTTTCACTCCCACCAGTTAAGCTACACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCTGCTGTTAAAGATTATGAAGCTAAGCGAGCCTCCGCTACTGCAAGCACAACAGCCACAGGAGAAAAATCTGCCACTGCATGA 519 0.4644 MMRIAVACAKRLVGTASFETQVPAIRVLPRFYHERVVDHYDNPRNVGSFDKNDPTIGTGLVGAPACGDVMKLQIKVDEKTGKIIDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRASATASTTATGEKSATA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2773 172 CDD IscU_like 32 147 IPR002871 GO:0005506|GO:0016226|GO:0051536
Tpr3g2773 172 Pfam NifU-like N terminal domain 32 156 IPR002871 GO:0005506|GO:0016226|GO:0051536
Tpr3g2773 172 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 26 168 IPR002871 GO:0005506|GO:0016226|GO:0051536
Tpr3g2773 172 Gene3D - 31 171 - -
Tpr3g2773 172 SUPERFAMILY SufE/NifU 31 155 - -
Tpr3g2773 172 TIGRFAM iscU: FeS cluster assembly scaffold IscU 32 155 IPR011339 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2773 Tpr-Chr3 28462755 28465780 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2773 K22068 - gmx:100806169 271.166