Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2671 ATGCTTGATTCCACGTGCTTTCGTAGGAATCCATTTACAGTCGCCGCTCAATCGTCTTCCACTCTCCCTCAAATCTTTTCTCTTCCTTCACCAATCCCTCAATGGCCTCAAGGACAAGGTTTTGCTTCAGGAGTTGTGAATCTTGGTGAAATAGAAGTTTTCAAGGTCACAAGATTTGAGTTAATTTGGAGCAGTGCTATACTAGACCCAAATAAACCTGTTATATTCTACAAGCCTGTGGAAATACCTAACAGTTTCCATATCCTTGGTCATTATTGTCAACCCAGTGACAAGCCTTTACGGGGTTTTGTACTTGTCGCAAAGGAAACAGGGACTCGATTGCCCGAAACTAATGAGGAAAAGTCACCTCTGAGGAAACCCCTTGATTTTAAGTTAGTTTGGAGTTCAAATCCACCTGACAATCTGGAAATTTCAAGTGGATGTGGTTACTTCTGGCTACCTGAACCTCCTGAAGGTTACAAGGCGGTTGGCTACTTTGTTACGGAAAAACCCAACAAGCCTGAGTTGGATGAAATGTGTTGTGTTCGTGCCGACCTCACTGACAAATGTGAACCTTACCGTGTAATATTTGCTGTTGGTTCTAGAAATCCGGAGTTTTCCTTCCAGGTATGGAGCTCCAGACCTTGCGATCGTGGCATGCTAGGAAAAGGTGTTTCTGTTGGGACTTTTATTTGCAGCAGTGGTTTGAGCAACGGAGAAGAGGATCATATTGCATGCTTGAAGAACTTAAATCCTTTGCTACCATCAATGCCTGATTTGCAACAAATTCATGCACTTATTAATCATTATGGCCCTACTGTTTTCTTTCACCCTGATGAAATCTACTTGCCATCTTCTGTTGATTGGTTTTTCAACCATGGAGCCCTTTTGTACCAAAAGGGTGTGCCTAAAGGCGAGGTAATTGATGAAGCTGGCTCAAATTTACCGTGTGGAGGATCAAATGATGGCGAATTTTGGATAGACTTGCCGAGTTACAATGATCTAAGGGTTTTTCTCAAACACGGGGACTTAAAAAGTGCGAAGCTTTATGTTCATGTGAAGCCAGCTCTTGGTGGGACTTTTACAGACATAGCAATGTGGATATTTGCTCCCTTCAACGGACCAGCCACTCTGAAAATTGGAATTAAGGATATACCTTTGAGCAAGATCGGCGAGCATGTTGGCGATTGGGAGCATTACACGCTTCGTATATGCAACTTTGCTGGAGAGCTCTATAGCATATACTTCTCACAGCACAGTGGCGGCGAATGGGTGGACGCATTTGACTTAGATTATATTGATGGAAATAAAGCTATTGTTTACTCGTCAAAATGTGGACATGCAAGTTACCCTCATCCTGGAACCTATATCCAAGGGTCTTCAAAACTAGGTCTTGGCATTAGGAACGATGCTGTTCGTAGTAATTTTTCCTTGGATTCTAGTATCCATTACGAGGTTGTTGCAGCTGAATATCTAGAAAATGTTGTCGATGAGCCTAATTGGTTGCAGTTTATGAGAAAGTGGGGTCCCAAAATTGTTTATGATTCAAAAACTGAGCTGGATAAGATTATCAATAAGCTTCCTCGCATGCTTCAGCATTCAATGAGAAACTTGTTTGACAAGTTTCCAGTGGAGCTGTATGGTGAAGACGGTCCTACTGGACCAAAAGAGAAAAATAATTGGATAAATGATGAGAGATGGTGA 1704 0.4214 MLDSTCFRRNPFTVAAQSSSTLPQIFSLPSPIPQWPQGQGFASGVVNLGEIEVFKVTRFELIWSSAILDPNKPVIFYKPVEIPNSFHILGHYCQPSDKPLRGFVLVAKETGTRLPETNEEKSPLRKPLDFKLVWSSNPPDNLEISSGCGYFWLPEPPEGYKAVGYFVTEKPNKPELDEMCCVRADLTDKCEPYRVIFAVGSRNPEFSFQVWSSRPCDRGMLGKGVSVGTFICSSGLSNGEEDHIACLKNLNPLLPSMPDLQQIHALINHYGPTVFFHPDEIYLPSSVDWFFNHGALLYQKGVPKGEVIDEAGSNLPCGGSNDGEFWIDLPSYNDLRVFLKHGDLKSAKLYVHVKPALGGTFTDIAMWIFAPFNGPATLKIGIKDIPLSKIGEHVGDWEHYTLRICNFAGELYSIYFSQHSGGEWVDAFDLDYIDGNKAIVYSSKCGHASYPHPGTYIQGSSKLGLGIRNDAVRSNFSLDSSIHYEVVAAEYLENVVDEPNWLQFMRKWGPKIVYDSKTELDKIINKLPRMLQHSMRNLFDKFPVELYGEDGPTGPKEKNNWINDERW* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2671 567 Pfam Vacuolar protein sorting-associated protein 62 23 565 IPR009291 -
Tpr3g2671 567 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 3 567 - -
Tpr3g2671 567 PANTHER - 3 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2671 Tpr-Chr3 26719355 26722676 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2671 - - gmx:100793026 858.981