Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2665 ATGGCGTCTGATCCAGAACAACCTCCAGTATCCTCTTTCTCTCAGGAAGGAAAATCATCCATTGAGGATAGAAGTGAAAGGGAGCGTCTGCTTAATGGATTTCATGGCACTCAAGACTATTCCGTCTCTGCTGCAATTCTCCCATTTCTCTTCCCAGCTTTTGGTGGTCTACTATTTGGCTATGACATTGGTGCCACATCTAGTGCAACAATTTCCATTCAGTCACCATCACAAAGTGGAATAACTTGGTATGACTTAGACTCCGTTGAAATTGGACTTCTCACTAGTGGATCATTATATGGTGCCTTAATAGGCTCTGTGTTAGCCTTCAATATTGCTGACTTTTTAGGAAGAAGAAGAGAGCTGCTTGTTGCTGCACTGATGTATCTTGTTGGAGCCCTCATAACAGCGTTCGCTCCTAATTATCCTGTATTGGTGATTGGAAGATTGGTATTTGGCATAGGAATTGGACTGGCAATGCATGCTGCTCCAATGTACATTGCGGAGACAGCTCCAACGCCAATACGTGGACAACTAATCTCTCTGAAAGAGTTCTTTATAGTTATTGGGATTGTTGCAGGGTATGGACTGGGTAGCGTGTTGGTAGACACTGTTGCTGGGTGGCGGTATATGTTTGGAATCAGTAGTCCTGTTGCAGTAATAATGGGATTTGGAATGTGGTGGCTCCCAGCTTCTCCTAGATGGCTACTTTTACGTGCTATACAGGGAAAAGGGGATCTTCAGAATTTGAAAGACACAGCTATTAGTAGTTTGTGCCAGCTTCAAGGTCCGACATTTCATGATTCTGCTTCTCAGCAAGTGGATGAGATTATGGCAGAGTTTTCTTATATAGGTGTAGAAAATGAGGTTACCTTTGTAGAAATGTTCCGTGGAAAATGCCGGAAGGCCCTTGTGATTAGTGCAGGATTGGTCTTGTTTCAACAGATCACAGGGCAACCAAGTGTTCTCTACTACGCCGCATCAATCCTTCAGAGTGCCGGATTCTCCTTAGCAGCTGATGCTACCCGGGTCTCTATTCTCCTTGGTGTATTTAAGTTGATTATGACTGGAGTGGCTGTTGTCGTCGTTGATAGACTTGGAAGGAGACCTTTACTACTTGGAGGAGTTTCAGGAATAGTGATCTCATTATTCTTACTGGGTTCATACTACATATTCTTGGATAATGCTGCAGTTCTTGCTGTAGTTGGTCTGCTACTCTATGTTGGTTGTTATCAGATTTCCTTTGGTCCAATGGGTTGGCTTATGATAGCTGAGATTTTTCCGTTGCGCCTGAGAGGTCGAGGACTTAGTATAGCAGTTCTTGTCAATTTTGCGGCAAATGCCCTGGTTACATTTGCCTTTTCCCCGCTGAAGGATTTACTGGGAGCAGGAATTTTGTTTTACATATTTTGTGCAATAGCCGTGGCGTCGCTTGTATTCATATACTTCATTGTACCAGAAACCAAGGGGCTTACACTAGAGGAAATTGAGGCAAAATGTCTGTGA 1506 0.4356 MASDPEQPPVSSFSQEGKSSIEDRSERERLLNGFHGTQDYSVSAAILPFLFPAFGGLLFGYDIGATSSATISIQSPSQSGITWYDLDSVEIGLLTSGSLYGALIGSVLAFNIADFLGRRRELLVAALMYLVGALITAFAPNYPVLVIGRLVFGIGIGLAMHAAPMYIAETAPTPIRGQLISLKEFFIVIGIVAGYGLGSVLVDTVAGWRYMFGISSPVAVIMGFGMWWLPASPRWLLLRAIQGKGDLQNLKDTAISSLCQLQGPTFHDSASQQVDEIMAEFSYIGVENEVTFVEMFRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLAADATRVSILLGVFKLIMTGVAVVVVDRLGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQISFGPMGWLMIAEIFPLRLRGRGLSIAVLVNFAANALVTFAFSPLKDLLGAGILFYIFCAIAVASLVFIYFIVPETKGLTLEEIEAKCL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2665 501 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 1 2 501 - -
Tpr3g2665 501 ProSitePatterns Sugar transport proteins signature 1. 359 375 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr3g2665 501 Gene3D MFS general substrate transporter like domains 39 499 IPR036259 -
Tpr3g2665 501 MobiDBLite consensus disorder prediction 1 23 - -
Tpr3g2665 501 MobiDBLite consensus disorder prediction 1 18 - -
Tpr3g2665 501 SUPERFAMILY MFS general substrate transporter 49 497 IPR036259 -
Tpr3g2665 501 PRINTS Sugar transporter signature 56 66 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2665 501 PRINTS Sugar transporter signature 146 165 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2665 501 PRINTS Sugar transporter signature 314 324 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2665 501 PRINTS Sugar transporter signature 401 422 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2665 501 PRINTS Sugar transporter signature 424 436 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2665 501 CDD MFS_GLUT10_12_Class3_like 51 496 - -
Tpr3g2665 501 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 489 IPR020846 GO:0022857
Tpr3g2665 501 ProSitePatterns Sugar transport proteins signature 1. 109 126 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr3g2665 501 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 2 501 - -
Tpr3g2665 501 TIGRFAM SP: MFS transporter, sugar porter (SP) family 43 496 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tpr3g2665 501 Pfam Sugar (and other) transporter 51 498 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr3g2665 501 ProSitePatterns Sugar transport proteins signature 2. 151 176 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2665 Tpr-Chr3 26623340 26630277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2665 1 501 Organic Solute Cotransporters AT5G17010 73.161 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2665 - - lja:Lj3g3v3639770.1 795.808