Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2642 ATGAGTGAAAATTTGAAGGGAAAAGTCAATGCCATTGGAGAGCGTCTCAAAATCAATGGAGCTGAAATGGGTAGAAAGATGAGTGCTGGAATGAGTACTATGAGTTTCAAGATGAAAGAGTTTTTTCAAGAACCAAACCAAGCTGATAAACTTGTTGCTGATGCTACTTCTGAGTCACTTGATTACACCAATTGGGATATTATTCTTCATCTTTGTGATTTAATTAATGCTGACAAAATTGATACTTGTGATGTTGTACGTGCCATAAAGAAAAGGGTTATGATGAAAAGTCCTAGAGGTCAGTACTTGGCTTTGGTTTTGCTTGAAATGTTGGTGAAGAATTGTGATAAGGGTTTCTTTGAGGTTGCTACTGAGAGAGTTCTTGATGAAATGGTTAAGATTGTTGATGATCCTGATCAGAGTTTTGTTGCTAGTAAGGAAAAGGCTTTGATGATGATTCGCGATTGGGGAGAGTCGACTACTGAGCTTCGGTATCTCCCTGTTTATGAAGAAACTTATAAGAGTTTGAAATCAAGGGGCATTAGGTTCCCTGATGGTTACAATGAAAGCAAGGCTTCTGTTTCTACTCCTTCTAGCTCTGCCTCTGCACCGATGGCTGATCTCAGTCTTGAATATCTTATTGACCATGATACTCAGCCTGATCTCACTCTTGCAAAAATTATTCAGTGCGAAAATCTTGTGCCATGTTTTACATCTCAACAAACAAAGGAAGCATTTGTTGTTGCAAGAAATATCATTCACCTTCTCTCTTCTGTGTTGCACAAAGATACTCTCAAGCAAGATTCGACCATCACATTACTACAACAGTGCCGTGAGTCCCAATCTACAGTCCACAAAATCATTGAGACAGTTGGGAATAATGAAGCACTGCTTTATGAGGCCTTGAATGTAAATGATGAGATCCATAAGGTTCTCTCCAAATATGAAGAGTTGAAGAAGAAGTCTAAAGTTTCTCCGCTTGAACCAGAACTGAATACGATGATACCAGTTGCTATTGAGCCAGATGAATCCCCTCATTTTAGAGAAGAGAACTTGATTAGAAAGCCATCTTGTTCAAGAACCGGAGTTCAGGGATTGAGCCATGATGACATGATGGATGATCTTGATGAAATGATTTTTGGCAAAAAAGGCGGGGATGCATCTCAATGGGGACAAGATCCTAAGAACCAACAACAATCATCAAAATATGACTTCATTTCCTTATAA 1227 0.3888 MSENLKGKVNAIGERLKINGAEMGRKMSAGMSTMSFKMKEFFQEPNQADKLVADATSESLDYTNWDIILHLCDLINADKIDTCDVVRAIKKRVMMKSPRGQYLALVLLEMLVKNCDKGFFEVATERVLDEMVKIVDDPDQSFVASKEKALMMIRDWGESTTELRYLPVYEETYKSLKSRGIRFPDGYNESKASVSTPSSSASAPMADLSLEYLIDHDTQPDLTLAKIIQCENLVPCFTSQQTKEAFVVARNIIHLLSSVLHKDTLKQDSTITLLQQCRESQSTVHKIIETVGNNEALLYEALNVNDEIHKVLSKYEELKKKSKVSPLEPELNTMIPVAIEPDESPHFREENLIRKPSCSRTGVQGLSHDDMMDDLDEMIFGKKGGDASQWGQDPKNQQQSSKYDFISL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2642 408 MobiDBLite consensus disorder prediction 382 408 - -
Tpr3g2642 408 SUPERFAMILY GAT-like domain 231 320 - -
Tpr3g2642 408 Pfam VHS domain 46 180 IPR002014 GO:0035091|GO:0043130
Tpr3g2642 408 Gene3D - 39 204 IPR008942 -
Tpr3g2642 408 SMART VHS_2 48 180 IPR002014 GO:0035091|GO:0043130
Tpr3g2642 408 Gene3D - 238 325 IPR038425 -
Tpr3g2642 408 PANTHER TOM1-LIKE PROTEIN 1 1 407 IPR044836 GO:0035091|GO:0043130|GO:0043328
Tpr3g2642 408 Coils Coil 301 321 - -
Tpr3g2642 408 MobiDBLite consensus disorder prediction 390 408 - -
Tpr3g2642 408 ProSiteProfiles VHS domain profile. 55 184 IPR002014 GO:0035091|GO:0043130
Tpr3g2642 408 SUPERFAMILY ENTH/VHS domain 42 184 IPR008942 -
Tpr3g2642 408 Pfam GAT domain 255 320 IPR004152 GO:0035091|GO:0043130
Tpr3g2642 408 CDD VHS 48 178 - -
Tpr3g2642 408 ProSiteProfiles GAT domain profile. 228 320 IPR004152 GO:0035091|GO:0043130
Tpr3g2642 408 PANTHER TOM1-LIKE PROTEIN 1 1 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2642 Tpr-Chr3 26271668 26275398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2642 - - ccaj:109799203 471.085