Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2628 ATGAAGAACGGTGAAGGCAAAGTAGTGTGTGTAACTGGTGCTTCCGGTTATATTGCTTCATGGCTTGTCAAATTTCTCCTTCAACGTGGTTACACTGTTAGAGCCACTGTTCGTGATCCAAGTAATCCTAATAAGGTTGATCACTTGCTTAAACTTGATGGTGCAAAGGAAAGATTGCAATTCTTTAAGGCAGATTTACTAGAAGAAGGTTCATTTGACTCTGTTATTCAAGGATGTCATGGTGTCTTTCACACTGCTTCACCTGTTCATTTCGTTTTCGACGACCCTCAGACACAATTAATTGATCCTGCCGTGAAAGGAACTCTTAATGTTCTTAAGTCATGTGCGAAATCACCATCCGTGAAACGAGTTGTTTTAACTTCTTCCATTGCCGCGTCTTTATATAATGGAAAACCTCGAACTCCAGAAGTTGTAGTTGATGAGACATGGTTTTCAAATTCAGATTTCTTAAGAGAAAATAAGATGTGGTATCAATTTGCAAAGACTTCAGCTGAGGAAGCTGCCACAAAATTTCTAACAGAAAACAACATTGACTATGTTGTTATGAATCCAGCAGTGTCGATAGGGCCTCTCTTGCAACCTGAAATTAATGAAACTTCCACTTTACTTCTTGACTTAATAAATGGTTCAGAAACATTTATGAATGCTGCTTTTGGATGGATCAATGTGAAAAATGTTGCAAACGCTCATATTCAGGCATACGAGGATGCTTCGGCTAGCGGAAGATATTGTTTGTGTGAAAGAGTGATACATTTCTCCGATCTTTCAAAAATTTTGAGGCACATGTACCCGACATTACAAATTCCAGATAAGTGTGCAGACGATAAACCTTTGATGCAAACATTTCAAGTTTCGAAAGAAAAGGCAAAGAAATTAGGAATTGAATTTATTCCACTGGAAGTGAGCCTCAAAGAGATCATAGAAAGTTTCAAAGAAAAAAAGTTTGTTAACTTCTAA 978 0.3753 MKNGEGKVVCVTGASGYIASWLVKFLLQRGYTVRATVRDPSNPNKVDHLLKLDGAKERLQFFKADLLEEGSFDSVIQGCHGVFHTASPVHFVFDDPQTQLIDPAVKGTLNVLKSCAKSPSVKRVVLTSSIAASLYNGKPRTPEVVVDETWFSNSDFLRENKMWYQFAKTSAEEAATKFLTENNIDYVVMNPAVSIGPLLQPEINETSTLLLDLINGSETFMNAAFGWINVKNVANAHIQAYEDASASGRYCLCERVIHFSDLSKILRHMYPTLQIPDKCADDKPLMQTFQVSKEKAKKLGIEFIPLEVSLKEIIESFKEKKFVNF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2628 325 Pfam NAD dependent epimerase/dehydratase family 9 243 IPR001509 -
Tpr3g2628 325 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 323 - -
Tpr3g2628 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 323 - -
Tpr3g2628 325 CDD FR_SDR_e 9 300 - -
Tpr3g2628 325 Gene3D - 7 325 - -
Tpr3g2628 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2628 Tpr-Chr3 25935313 25938201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2628 3 325 Miscellaneous Gene Families AT5G19440 65.015 1.23e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2628 - - gmx:100804704 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2628 3 25935313 25938201 Tpr3g2628 3 25935313 25938201 ECH