Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2627 ATGGTTCTAGTTTCTCGCATGGCTTCAGTAGTTGCTCCGTTACTTCTTCATAACACCCCCAACCAACATTCTAGCCTCCCATATCTCTCCCATTCCCAACCTTTGTTTTCAAGATCCACTCATCATAAATCCAAACTTATCTTCCTTTCAAAAAATACTAATACTTCGCCGGTATTATTCCTCAAACGCTCTTCTTCTTCATCCAGATCGTCCACGCTGGACGATTTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACACTGAAGAAGATGAAGAAGGAGAATCGCAACCACCACCCTTGAGCGAAGTATGGAGGGAAATCCAAGGCAAGAACAACTGGGAAGGTCTATTAGATCCAATGGACTCCAACCTACGCAAAGAAATCATTCGATATGGTGAACTCGCTCAAGCGTGCTACGATTCATTCGACTTCGATCCACACTCGAAATATTGTGGAACATGCAAGTATCATCCTACACATTTCTTTGAGAAACTGGACATGCCAGATTGTAGTGGATACACCATAAGTAGGTACCTCTATGCAACATCAGATATCAATCTTCCTAACTTCTTTCAGAAATCAAAGATCTCAGATGTGTGGAGTACACATGCTAATTGGATGGGTTACATAGCTGTTGCCACTGATGAACAAGAGATCAAACGTTTAGGACGCCGTGACATAGTTATTGCATGGAGGGGCACAGTGACATACATAGAATGGATATACGACCTAAAAGACATCCTACATGAAGCAAACTTCAAGAACGACCCAACAATCAAAGTAGAATCAGGATTCCATGAATTATACACAAAAAAAGAAGATTCATGCAATTATTGTTCCTTCTCAGCTCGTGAACAAATACTCTCCGAAATAAAACGCCTTATCGAATACTATGAAGAGGAAGAACTTAGCATCACAATCACCGGACACAGCCTCGGCGCAGCCTTAGCCATACTCAGCGCATATGACATAGCCGAATTAAAACTAAATGTCGTTAAAGATGGCGACGAAACAACTACTATCCCCATAACGGTTTACTCGTTTGCGGGGCCTAGGGTTGGGAATTTGAAATTTAAAGAAAGGTGTGAGGAGCTTGATGTTAAAGTTTTGAGAATAATAAATGTTCATGACATGGTTCCAACTGTGCCAGGGTTTATAACAAATGAGAAATTTCAATTTCAAAAGTATATCGAAGATGCATTATCTTTTCCTTGGAGTTATGCACATGTTGGAAGTGAAATTAAATTGGATCATAGAGAAAGTCCTTTTTTGAAGCAAAATGGTGACATGGGTTGTGCACATAATTTAGAGGTATTATTGCATTTAATGGATGGGTATCATGGTAAAGGGAAAAAATTTAATTTGGTATCAAAAAGAGATATTGCACTTGTGAACAAGAGCTGTAATTTGCTACGGAGTGAGTATGGTGTACCACCATATTGGAGACAAGATGAGAATAAAGGAATGATTAGATCCAATGATGGAAAGTGGGTTGTGCCTGAACGGCCAAGATTGGAAGCTCATCCACCACATACAGCACATCATCTTCAGTTAGTGCTACAAAATCACATTCTTGTTAATGGTAGCTTTAAATCAGGGACCACGTGA 1614 0.3978 MVLVSRMASVVAPLLLHNTPNQHSSLPYLSHSQPLFSRSTHHKSKLIFLSKNTNTSPVLFLKRSSSSSRSSTLDDLEEEEEEEEEEEDTEEDEEGESQPPPLSEVWREIQGKNNWEGLLDPMDSNLRKEIIRYGELAQACYDSFDFDPHSKYCGTCKYHPTHFFEKLDMPDCSGYTISRYLYATSDINLPNFFQKSKISDVWSTHANWMGYIAVATDEQEIKRLGRRDIVIAWRGTVTYIEWIYDLKDILHEANFKNDPTIKVESGFHELYTKKEDSCNYCSFSAREQILSEIKRLIEYYEEEELSITITGHSLGAALAILSAYDIAELKLNVVKDGDETTTIPITVYSFAGPRVGNLKFKERCEELDVKVLRIINVHDMVPTVPGFITNEKFQFQKYIEDALSFPWSYAHVGSEIKLDHRESPFLKQNGDMGCAHNLEVLLHLMDGYHGKGKKFNLVSKRDIALVNKSCNLLRSEYGVPPYWRQDENKGMIRSNDGKWVVPERPRLEAHPPHTAHHLQLVLQNHILVNGSFKSGTT* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2627 537 CDD Lipase_3 180 421 - -
Tpr3g2627 537 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 37 523 - -
Tpr3g2627 537 MobiDBLite consensus disorder prediction 61 102 - -
Tpr3g2627 537 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 37 523 - -
Tpr3g2627 537 MobiDBLite consensus disorder prediction 74 98 - -
Tpr3g2627 537 Coils Coil 66 96 - -
Tpr3g2627 537 Pfam Lipase (class 3) 230 387 IPR002921 GO:0006629
Tpr3g2627 537 Gene3D alpha/beta hydrolase 105 511 IPR029058 -
Tpr3g2627 537 SUPERFAMILY alpha/beta-Hydrolases 123 449 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2627 Tpr-Chr3 25897399 25901033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2627 102 537 Acyl Lipid Metabolism Gene Families AT1G51440 70.562 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2627 - - mtr:MTR_4g077070 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2627 3 25897399 25901033 Tpr3g2627 3 25897399 25901033 ECH