Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2601 ATGGTCAGAAAACATGGCTGGCAATTACCAGCGCACACTTTTCAGGTTGTTGCAATCACTGTATTCTGCTTGTTGGTGATTGCTTTCTATGCTTTCCTTGCTCCGTTTGTTGGAGGTCATATATTGGAATACATCTTCATTGGTGTCTACTCTCCGGTGGTATGCAAATTACCTTTTTATAATCCCACCACATTTCGTATGTATTATTTACTTACCTACAAGAGGTATGGCTTATGTTGTCTCTTTCTTGTGGCATTGCAGGCACTCATTGTTTTCATTCTTTATGTTAGATGCACTGCAATTAACCCTGCAGATCCAGGCATTATGTCTAAATTTGACCCTAGAGTGGTAAATAGGTTTGACTCTGCCCATGGTTTGTTGGGTAAGCATCAATCATCTGAACGTGATGTTGCTGCAGGAGGGCATTCTTCCCCGTCATCCGCAGCTTCCAAAAGGTCTATAACAAATATGAGCAAGAAAAGTTCAGTGGAAGATCCTGAGCGAGTACAGGATTCTAGATATCAGAATAACCCAAACTCATGTGATGCAATTGGGAGAATTTTCTGCATATTATTTTCTCATGAAGATTGCCGGAAACAAGAAGAAACAGCTGATGAGCAGGGTGGCGGGGAAGATGCTCTGTTCTGCACTTTGTGCAATTCTGAGGTGCGCAAGTTCAGTAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTCAACAACTGTGTGGGTCAGAAAAATTACCATTCTTTTATTTCTCTTATGGCCTTCAGTCTTACATGGCTTGTTATTGAAGCTGGAGTAGGTATTGCTGTTTTAGTGCGTTTCTTCGTTAACAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGTCCCCCGTTTGCTGCAGTTGTGGTTGTATGTACTGCAGTTTCTGTCTTGGCTTGTGTCCCCTTGGGTGAGCTTTTCTTTTTCCACATGATCCTAATCAGGAAGGGTATTACAACCTATGAATATGTTGTAGCAATGAGAGCCATGAGTGAAGCACCTGCAGGGGCATCTTTGGATGGGGATTTGCAAAATGCACTTTACTCTCCAACAGGCTCAGCCACAACTGGATTGAGTGGAGGAAGTTCTCTTGGGTTGCAGTACAAAGGGGCATGGTGTACCCCTCCTAGGGTATTCGTGGATTATCAGGATGAAGTTGTGCCTCACTTGGATCCTGGAATGCTGCCATCAACTGTTGATCCAGATGCAGCCGGGTTTGCAGAAAGAGGGCAAAAGATGCCAAAAAGGGCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAGTTGGATTCTCAAGAAGCAGTGAAAGCAGCTGCAAAAGCCAGGGCATCTTCTTCTGTTCTGCGACCTGTAGATAGCCACCGTCCACTTGATGCAGAATTAAGTTCTAGTGGCAACATGAGCATCAGAAGTAGTATGAGCGCAGAGACTGGAATTAATAAGGAAATTAAAAATGAGTTGAGATTGTCTCCAGTAAGGAATTTGATTGCTCCTAGTCAAGGAAGCCGTGACGAGTATGAAACTGGAACTCAAAGTATGAGTAGTTTCAGTAGTCCAAGCCATGTTCAAGAGGCAGTTACACTCAGCCCTCTTCCACAGGGCCGCACTTTGGGTGGCTTCAGGGCTGGTACTTCAGTTCCTAGTTTGGTGCCTGAGCGTCCTTTAACTTCTAAAGCAACATTGCCGAACTTCAGGAACCCGGTATCCAATCCTCCTCTTGGATTTGATGGAACAACGATTCCAAAGGGAACAAATAATGAGCCGTTACTGCTTTCAGCTTCCAGTACGTCCATTCTAAGAGATGTGAAACGGACATCAGTTGTTTGGGATCAAGAAGCCGGCAGATATGTCTCGGTTCCTTCTTTACCTTCAGAAGCTCGAAATAGATCATCCCTGCAAGTAGAATTGCCAAATTCAATTGCTGAAACAAGCGGTATTGGAAGGAAACCAATGATACCTCCAAAACCAGCAATACTTCCACAGGAGTTGTCGTCATCTGCGCCCAAGTCTCCAAGGCAACATGCACAGAATCTGATGTATACAGGAGAGTCTATCTTTTTTGGTGGTCCATTTTTGAGTGTGGCTGCTAAGGAAGGTTTGAGAAACGAAAGACATTTGGGATCAGTGGAGGCCCGTGATAGCACAGCAGTAAACTTGCCCCAAGAGCCAAGATATAGAAGAGATACACATTCAAATCAGCTTCCAGTGTTTGTTCCTGGTGGTTTTGATAATGCTCTTCAACCTCGGTCCGGCATGAATTAG 2328 0.4403 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFVGGHILEYIFIGVYSPVVCKLPFYNPTTFRMYYLLTYKRYGLCCLFLVALQALIVFILYVRCTAINPADPGIMSKFDPRVVNRFDSAHGLLGKHQSSERDVAAGGHSSPSSAASKRSITNMSKKSSVEDPERVQDSRYQNNPNSCDAIGRIFCILFSHEDCRKQEETADEQGGGEDALFCTLCNSEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGQKNYHSFISLMAFSLTWLVIEAGVGIAVLVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVVVCTAVSVLACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPAGASLDGDLQNALYSPTGSATTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLDPGMLPSTVDPDAAGFAERGQKMPKRAVRISAWKLAKLDSQEAVKAAAKARASSSVLRPVDSHRPLDAELSSSGNMSIRSSMSAETGINKEIKNELRLSPVRNLIAPSQGSRDEYETGTQSMSSFSSPSHVQEAVTLSPLPQGRTLGGFRAGTSVPSLVPERPLTSKATLPNFRNPVSNPPLGFDGTTIPKGTNNEPLLLSASSTSILRDVKRTSVVWDQEAGRYVSVPSLPSEARNRSSLQVELPNSIAETSGIGRKPMIPPKPAILPQELSSSAPKSPRQHAQNLMYTGESIFFGGPFLSVAAKEGLRNERHLGSVEARDSTAVNLPQEPRYRRDTHSNQLPVFVPGGFDNALQPRSGMN* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2601 775 MobiDBLite consensus disorder prediction 130 174 - -
Tpr3g2601 775 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 54 - -
Tpr3g2601 775 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 88 571 - -
Tpr3g2601 775 MobiDBLite consensus disorder prediction 517 546 - -
Tpr3g2601 775 Pfam DHHC palmitoyltransferase 213 348 IPR001594 GO:0016409
Tpr3g2601 775 PANTHER PROTEIN S-ACYLTRANSFERASE 19-RELATED 88 571 - -
Tpr3g2601 775 PANTHER PROTEIN S-ACYLTRANSFERASE 19-RELATED 9 54 - -
Tpr3g2601 775 MobiDBLite consensus disorder prediction 137 160 - -
Tpr3g2601 775 ProSiteProfiles DHHC domain profile. 214 264 - -
Tpr3g2601 775 MobiDBLite consensus disorder prediction 579 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2601 Tpr-Chr3 25427657 25435041 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2601 215 345 Lipid Metabolism Gene Families AT4G22750 29.008 2.55e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2601 K20027 - gmx:100805779 1190.64