Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2587 ATGAAAGGAGGAAGAGAAAAAATGCATAGAAAAACAGATTCACAAGAAACAACAAACAGCATGGAACAATCTTCTTCAACACCAAACCGTTCACCTTCTCGTAGACCATTATACTATGTTCAAAGTCCTTCAAACCATGATGTTGAAAAAATGTCTTATGGTTCTAGTCCTATTGGTTCACCACCTCATCAAAATTTTCATTACTATCTTTCTTCTCCTATTCATCATTCTCGTGAATCTTCTACTTCTCGTACTTATTCTGCTTCTTTGAAAAATCCGAGGAATATTTCTTCTACTTCTTGGAAGAAACTGAATCAGATGAATATTCATGGTGATCTTGATGAAGAGGATGAAGATGATGTTGGTGTTCATGATTCTGGTCGTGTAAGGATGTACTTTTGTTTCTTCTTGCTTTTCGTGTTGCTTTTTACTTTGTTTTCGTTGATTCTTTGGGGTGCTAGTAAAAGCTACAAGCCTCGTGTTATTCTTAAGAGTATAATGTTCGAGACTTTGAATGTACAATCTGGTAACGATGCATCGGGGGTACCAACAGATATGTTGTCATTGAATTCAACGGTTAGGATCTTATACAGAAATCCTGCAACTTTCTTTGGTGTTCATGTCACGTCTACACCTCTGAAGCTTAGCTATTACCAGCTCACACTTGCTTCTGGTCAGATACATGAGTTCTATCAATCAAGGAAGAGTCAGAGGAATCTAGCAGTAACGGTGCTTGGACACCAAGTTCCTCTCTACGGCGGTGTATCAGTTCTTGGAAACACTAACGCAGAACACATGAAAACTGTTGCATTGCCAATGAACCTAACATTTGTTGTGAGATCAAGGGCTTACATTTTGGGAAGATTGGTTAAGTCTACATTCTATCGGAGAATCAGATGTTCAATCACTTTTCATGGCAACAAACTTGGAAAACATCTTAATTTCACAAACTCATGTGTCTACAACTGA 969 0.3787 MKGGREKMHRKTDSQETTNSMEQSSSTPNRSPSRRPLYYVQSPSNHDVEKMSYGSSPIGSPPHQNFHYYLSSPIHHSRESSTSRTYSASLKNPRNISSTSWKKLNQMNIHGDLDEEDEDDVGVHDSGRVRMYFCFFLLFVLLFTLFSLILWGASKSYKPRVILKSIMFETLNVQSGNDASGVPTDMLSLNSTVRILYRNPATFFGVHVTSTPLKLSYYQLTLASGQIHEFYQSRKSQRNLAVTVLGHQVPLYGGVSVLGNTNAEHMKTVALPMNLTFVVRSRAYILGRLVKSTFYRRIRCSITFHGNKLGKHLNFTNSCVYN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2587 322 MobiDBLite consensus disorder prediction 1 16 - -
Tpr3g2587 322 MobiDBLite consensus disorder prediction 1 54 - -
Tpr3g2587 322 MobiDBLite consensus disorder prediction 17 54 - -
Tpr3g2587 322 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 68 322 - -
Tpr3g2587 322 Pfam Late embryogenesis abundant protein 195 301 IPR004864 -
Tpr3g2587 322 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 68 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2587 Tpr-Chr3 25004585 25007848 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2587 - - cam:101514813 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2587 3 25004585 25007848 Tpr3g2587 3 25004585 25007848 ECH