Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2584 ATGAAGCTCATGATGAATCAACCATCACAATTACTTGCTTTGTTGAGTTTTTGCTCAATTTTTTCCCTTGTTGTTTCGGAAGACCCTTATAGATTCTTTGATTGGAACATTACTTATGGTGACATTTATCCACTTGGAGTTAAACAACAGGGGATTCTTATCAATGGTCAATTTCCAGGACCTGAAATTTATTCTGTAACCAATGATAATTTGATCATCAATGTACACAATAACTTGCCTGACCCATTTCTTCTATCATGGAATGGTGTTCAACAGAGGAGAAATTCTTATCAAGATGGAGTTTATGGAACCACATGTCCTATTCCTCCTGGCAAGAATTTCACATACACACTTCAAGTTAAAGATCAAATTGGAAGCTTCTTCTATTTTCCATCTCTTGCTTTCCACAAAGCAGCTGGTGGTTTTGGATCCATCAAAATCCTTAGTAGACCATTGATTCCTGTTCCTTTCCCTGACCCTGCTGATGATTACACATTTCTCATTGGTGATTGGTACAATATTGAGCACACGAGGCTGAGTAAAATTCTAGATTTTGGACACAAACTTCCATTCCCTCAAGCAGTTCTTATCAATGGTCGTGCACAAGGTTCAGCATTCACAGTTGAACAAGGGAAAACATATAGACTTAGAATATCAAATGTTGGACTACAAAACACACTCAACTTTAGGATTCAAGACCATATAATGAAATTGGTTGAAGTTGAAGGAACTCACACTGTACAAACATCTTATTCATCAATAGATGTTCATGTTGGACAATCTTATTCTGTACTTATCACAGCTGATCAAGCACCTAAGGACTATTACATTGTTGCTTCTACTCGTTTTACTAATAGGACCCTCACAAGCACTGCATCACTTCACTATAGTAACTCACAGCAACCTCTTTCTGGCCCTATTCCTGGTGGACCAACCACTGAGATTGATTGGTCATTCAACCAAGCTCGATCAATCAGGACAAATCTTACAGCAAGTGGACCAAGGCCAAATCCACAAGGTTCATACCACTATGGCATGATAAACATTAGTAGAACAATCAATCTACGGAGTTTTGCAGCACAAGTGAATGGAAAGCAAAGATATGCAGTCAACAGTGTATCTTTCATACCAGCTGACACTCCTCTGAAGCTAGCTGATCACTTTAAGATTGACGGTGTTTTTCAAGTCGGAAGCATCCCAGATAGCCCTTCTGGTAAACCGATGTATCTTGATACTTCAGTCATGGGTGCTGATTTTCGAGCCTTCGTTGAGATCGTGTTTCAAAACCGTGAAAGTATCGTCCAAAGTTGGCACATTGACGGTTACTCATTTTGGGTTGTCGGGATGGATGGTGGTACGTGGACACCTAATAGTCGTAACCAATACAACCTCAGAGATGCTGTGTCTAGGAGCACAACACAGGTATATCCTAAGTCATGGACTGCAATTTATATGGCACTAGACAATGTGGGTATGTGGAATATTAGGAGTGAATTTTGGTCACGACAATATCTTGGACAACAATTCTATCTAAGAGTATATTCAGATGCTGGATCCATTAGAGATGAATATCCAATTCCTAAGAATGCTCTTCTTTGTGGCAAAGCTGTGGGCAGAGAAACAAGACCATTATAA 1635 0.3945 MKLMMNQPSQLLALLSFCSIFSLVVSEDPYRFFDWNITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNNLPDPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGSIKILSRPLIPVPFPDPADDYTFLIGDWYNIEHTRLSKILDFGHKLPFPQAVLINGRAQGSAFTVEQGKTYRLRISNVGLQNTLNFRIQDHIMKLVEVEGTHTVQTSYSSIDVHVGQSYSVLITADQAPKDYYIVASTRFTNRTLTSTASLHYSNSQQPLSGPIPGGPTTEIDWSFNQARSIRTNLTASGPRPNPQGSYHYGMINISRTINLRSFAAQVNGKQRYAVNSVSFIPADTPLKLADHFKIDGVFQVGSIPDSPSGKPMYLDTSVMGADFRAFVEIVFQNRESIVQSWHIDGYSFWVVGMDGGTWTPNSRNQYNLRDAVSRSTTQVYPKSWTAIYMALDNVGMWNIRSEFWSRQYLGQQFYLRVYSDAGSIRDEYPIPKNALLCGKAVGRETRPL* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2584 544 SUPERFAMILY Cupredoxins 25 176 IPR008972 -
Tpr3g2584 544 Pfam Multicopper oxidase 163 298 IPR001117 -
Tpr3g2584 544 Gene3D - 20 148 IPR008972 -
Tpr3g2584 544 Pfam Multicopper oxidase 37 149 IPR011707 GO:0005507
Tpr3g2584 544 Pfam Multicopper oxidase 380 516 IPR011706 GO:0005507|GO:0016491
Tpr3g2584 544 PANTHER MULTI-COPPER OXIDASE 15 537 IPR045087 -
Tpr3g2584 544 CDD CuRO_3_AAO_like_1 377 498 IPR034275 GO:0005507
Tpr3g2584 544 SUPERFAMILY Cupredoxins 346 535 IPR008972 -
Tpr3g2584 544 CDD CuRO_1_AAO_like_1 32 147 IPR034273 GO:0005507
Tpr3g2584 544 SUPERFAMILY Cupredoxins 157 336 IPR008972 -
Tpr3g2584 544 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 15 537 - -
Tpr3g2584 544 Gene3D - 345 540 IPR008972 -
Tpr3g2584 544 Gene3D - 161 335 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2584 Tpr-Chr3 24969159 24974828 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2584 - - gmx:100793934 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2584 3 24969159 24974828 Tpr3g2584 3 24969159 24974828 ECH