Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2581 ATGGAGAAGAGTGGTTCATGTTCTTCGAAGACAGTTGAAGTTCTAGATGGTTCTAATATTATGGAGTTAGTTGGAAACAAAGATGTATTCAACAATTATGTGAACCATAAGTTTCAAGAGTTAGATAAAGATAAAGATGGTAAACTATCTGTAAAAGAACTTCAACCTGCTGTTTCTGATATTGGTGCTGCTCTTGGTTTACCTTCTAAAGGCACTAATCCTGATTCTGATCACATCTATTCTCAGGTGTTGAATGAATTCACACATGGAAAGCAAGAAAAAGTGAGCAAGACTGAGTTCAAAGAGGTTCTCTCAGACATTCTATTGGGCATGGCTGCTGGACTCAAACGAGACCCGATTGTCATACTTCGCATTGATGGCGAAGATCTTTTCGAGTTTCTTAATGGTTCAACTTATGAACCAGAAATCGTATCTATATTCTCTCAAATTGAATCACCTCATAAATCATTTCACGACTATATAATTCAAGCTCTCAGCAAACTCAATGTTGACCAAGGGATTCCACCTACATCTGATTCTTGGGTTGTTAGCAACATTGTGGAACCAGCACTGGTTTCTGAACATGGGTATGATTTGGATAAACCTGTTTCGCAAGAGATCTTTTTGGAGGAATTCAAGAAAGTGGCATTGAGTGTCGCTAATCGTCTTAAGGAGCAACCTGTTATAGTCGCTCATAGCGAAAGTACCTTTGATGGAAGCGGTGTTAAGAGACTATTATCCAACAAGTTTGAATTAGACAAGATATTGAACTCGGCTATAGAGACTTTACCTAAAGATCGAAATGGAAAAATGTCAAAGGATTACCTAAGAGTGGCGCTTGACGTGGTGGCTCCATCTGCTGCTTTACCTCCATTTGGAGCAATTGAAGAGATGGATAAGGTTATTGGTGAAGTGTTTAAGATGGTGAGTGCAGATGATGCAAAGTTGGTGAAAGAAGATGAGTTCAAGAAAATACTAACTGAAATATTGGGGAGTATCATGTTGCAGTTGGAAGGAAATCCCATATCAGTTTCTTCAAATTCTGTAGTGCATGAGCCTCTAGGCTCATCTTCTACACTTCTGCAGCCATCCCCTGCTGAAACAGCATAA 1110 0.3919 MEKSGSCSSKTVEVLDGSNIMELVGNKDVFNNYVNHKFQELDKDKDGKLSVKELQPAVSDIGAALGLPSKGTNPDSDHIYSQVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLFEFLNGSTYEPEIVSIFSQIESPHKSFHDYIIQALSKLNVDQGIPPTSDSWVVSNIVEPALVSEHGYDLDKPVSQEIFLEEFKKVALSVANRLKEQPVIVAHSESTFDGSGVKRLLSNKFELDKILNSAIETLPKDRNGKMSKDYLRVALDVVAPSAALPPFGAIEEMDKVIGEVFKMVSADDAKLVKEDEFKKILTEILGSIMLQLEGNPISVSSNSVVHEPLGSSSTLLQPSPAETA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2581 369 Gene3D - 26 329 - -
Tpr3g2581 369 ProSiteProfiles EF-hand calcium-binding domain profile. 29 64 IPR002048 GO:0005509
Tpr3g2581 369 SUPERFAMILY EF-hand 36 340 IPR011992 -
Tpr3g2581 369 Pfam EF-hand domain pair 36 103 IPR002048 GO:0005509
Tpr3g2581 369 SMART efh_1 255 283 IPR002048 GO:0005509
Tpr3g2581 369 SMART efh_1 33 61 IPR002048 GO:0005509
Tpr3g2581 369 SMART efh_1 301 329 IPR002048 GO:0005509
Tpr3g2581 369 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 9 368 - -
Tpr3g2581 369 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 9 368 - -
Tpr3g2581 369 ProSitePatterns EF-hand calcium-binding domain. 42 54 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2581 Tpr-Chr3 24944080 24948927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2581 13 360 EF-hand Containing Proteins AT4G38810 68.376 1.79e-171 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2581 - - gmx:100820516 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2581 3 24944080 24948927 Tpr3g2581 3 24944080 24948927 ECH