Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2559 ATGGCACCACCACCACCACCGGCGATCCAATCGCCGAATCCAGAAGAAATCCAACAATTCCTAAGCTCCGTTCTCTCACAACGCGGTCCATCAGCAGTACCATACGCAGAAGACACTAAATGGCTTATCCGTCAACATCTTCTCACTCTCATCACAGCTTTCCCTTCTCTTGAACCCAAAACCGCCACTTTCACTCACAACGACGGCCGCACCGTTAATCTCCTCCAAGCCGACGGAACTATTCCGATGACATACCAATCCGTCACATACAATATCCCCGTTGTTATTTGGCTCATGGAATCTTACCCTCGTCATCCACCTTGTGTTTATGTTAACCCTACCAGAGACATGATTATCAAACGCCCTCATCCTCATGTTAATCCTTCTGGTTTAGTTTCTGTTCCTTATTTGCATAATTGGGTTTACCCTAGTGCTACTTTGGTTGATCTTGTTTTATCTTTGAGTGTTATTTTTGGTCGTGATCCTCCTCTTTATTCCCAACGTAGACCTAGTAATAATAACCCTAATCCTAATCCTAATCCTAATCAAAACCCTATTGTTAATCCTCATCATAATCATCATCCTAATCCAAATATCAATCAAAGTTCTAATTTTGCAGCTGTTTCTTCATCTGGGTATGTTCATCCTGCTAGGAATAATAATTACCCTCCTTCGCCTTATTCGCCTTCGCCTGTGCGGCCTGCTCATACTGAGGATCCAACTGAGGTTTTCAAAAGGAATGCTATTAATAAGCTTGTGGAGATGGTGCATAATGATGTTACGAATTTGAGGAAGACGAGGGAAGCTGAAATGGAGGGTTTGTTTAGTTTGCAAGGGGTTTTGAAGCAGCGTGAGGAGGTTTTGAATAAGGGTGTGAAGGAAATGCAAGAGGAGATGGAGGGTTTGGAACAGCAGCTTCAGATGGTTTTGATGAATACTGATGTTTTGGAGGGTTGGTTGAGGGATAATCAAGGGAAGAAGATGAGTTTGGAGAATGTTGAGGATGCTTTTGAGTGTGTGGATGTGCTTTCTAAACAGATGCTTGAGTCTACTGCTGCTGATTTGGCTATTGAAGATACACTTTATGCGTTGGATAAAGGTGTTCAGGTTGGAGCTGTACCGTTTGATCAGTACATGAGGAGTGTCAGGGTGTTGTCGAGGGAGCAGTTCTTTCACCGAGCTATGGCTGCTAAAGTTAGAGCTGCTCAGTTGCAGGCTCAGGTTGCTAATATGGCTGCAAGGAATCATCATTATGGTAGCTGA 1263 0.4363 MAPPPPPAIQSPNPEEIQQFLSSVLSQRGPSAVPYAEDTKWLIRQHLLTLITAFPSLEPKTATFTHNDGRTVNLLQADGTIPMTYQSVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLHNWVYPSATLVDLVLSLSVIFGRDPPLYSQRRPSNNNPNPNPNPNQNPIVNPHHNHHPNPNINQSSNFAAVSSSGYVHPARNNNYPPSPYSPSPVRPAHTEDPTEVFKRNAINKLVEMVHNDVTNLRKTREAEMEGLFSLQGVLKQREEVLNKGVKEMQEEMEGLEQQLQMVLMNTDVLEGWLRDNQGKKMSLENVEDAFECVDVLSKQMLESTAADLAIEDTLYALDKGVQVGAVPFDQYMRSVRVLSREQFFHRAMAAKVRAAQLQAQVANMAARNHHYGS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2559 420 PANTHER PROTEIN ELC 12 415 - -
Tpr3g2559 420 SUPERFAMILY Endosomal sorting complex assembly domain 341 401 IPR037202 -
Tpr3g2559 420 ProSiteProfiles Steadiness box (SB) domain profile. 341 409 IPR017916 -
Tpr3g2559 420 Gene3D Ubiquitin Conjugating Enzyme 9 165 IPR016135 -
Tpr3g2559 420 Gene3D - 342 402 - -
Tpr3g2559 420 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 12 415 - -
Tpr3g2559 420 Pfam Vps23 core domain 336 398 IPR017916 -
Tpr3g2559 420 ProSiteProfiles UEV domain profile. 24 168 IPR008883 GO:0015031|GO:0036211
Tpr3g2559 420 SUPERFAMILY UBC-like 27 164 IPR016135 -
Tpr3g2559 420 Pfam UEV domain 44 164 IPR008883 GO:0015031|GO:0036211
Tpr3g2559 420 Coils Coil 285 312 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2559 K12183 - gmx:100778834 583.178