Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2551 ATGGCAGGAACAGCAACAGGTTGTTACAAATGTGGAAGACCAGGTCACTGGTCACGCGACTGTCCTTTCTCCGCCCCCAATCCAAACCCTAATTCCTCCAAAACCACCGATGATCTTCCTCCACCTCCTCCTTCCTCTTCCTTCAAACCTTCTGTTCCTAGATCCGCCGTCGAAAAGCCCAAAAAGCTCCCACGCACCCGTCCAAAACTCACTCCCGAGCTTCTTCTTTCCGATGACGGTCTTGGTTACGTTCTTCGCTATTTCCCTCGCAACTTCAAATACCACGGTCGTGGCCACGAGGTTCGTGATTTGGGTAACTTGCTTGACTTGTACTCTGAATGGCACTCTCGTTTGCTACCTTATTATTCCTTCAATCAATTTGTTCACAAAGTTGAGAAAGTTGCTGCTACTAGGCGTGTAAAGACTAGCCTTAGAGAATTGAGAGAAAGAGTTGCAAATGGTGGGGATCCATCAAAATTGCGTGAACCACCAGTTGTGCATGACATCCCAGATGGTGAACAAGAAAATGGAGAAGCAAGTCATCAAGTGAATGAGGTGTTTGCAGAACCTGGAAATGTTAATGACATTCAAGAAGACATGTTGAATGATATATTTGACAAAGCTACCGAAGAACCTTCTCAGCCCATGCAAAATGTCATTAGTGCGAGTACCGATCCCAAAAGTAGTGCAGTTGAAAAGACATCAAATGAAGTCCCAAATAGTGGAGCCAGTCTGTCCAGCAATGCTGGGATAACAGCAGAGCAGAGAGCCCGTATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGCGCAGCTCGAGCCAGCATATCACAGTCTTCCTAG 843 0.4662 MAGTATGCYKCGRPGHWSRDCPFSAPNPNPNSSKTTDDLPPPPPSSSFKPSVPRSAVEKPKKLPRTRPKLTPELLLSDDGLGYVLRYFPRNFKYHGRGHEVRDLGNLLDLYSEWHSRLLPYYSFNQFVHKVEKVAATRRVKTSLRELRERVANGGDPSKLREPPVVHDIPDGEQENGEASHQVNEVFAEPGNVNDIQEDMLNDIFDKATEEPSQPMQNVISASTDPKSSAVEKTSNEVPNSGASLSSNAGITAEQRARMEANRLKALERRAARASISQSS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2551 280 MobiDBLite consensus disorder prediction 211 253 - -
Tpr3g2551 280 SUPERFAMILY Retrovirus zinc finger-like domains 6 24 IPR036875 GO:0003676|GO:0008270
Tpr3g2551 280 Pfam Zinc knuckle 7 22 IPR001878 GO:0003676|GO:0008270
Tpr3g2551 280 MobiDBLite consensus disorder prediction 22 70 - -
Tpr3g2551 280 MobiDBLite consensus disorder prediction 35 49 - -
Tpr3g2551 280 Pfam Replication Fork Protection Component Swi3 69 150 IPR012923 GO:0005634|GO:0006974|GO:0048478
Tpr3g2551 280 PANTHER TIMELESS-INTERACTING PROTEIN 4 276 - -
Tpr3g2551 280 PANTHER TIMELESS INTERACTING-RELATED 4 276 IPR040038 GO:0000076
Tpr3g2551 280 ProSiteProfiles Zinc finger CCHC-type profile. 8 22 IPR001878 GO:0003676|GO:0008270
Tpr3g2551 280 MobiDBLite consensus disorder prediction 210 257 - -
Tpr3g2551 280 Gene3D - 4 67 - -
Tpr3g2551 280 SMART c2hcfinal6 7 23 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2551 Tpr-Chr3 24686642 24690445 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2551 K10904 - gmx:100799216 372.859