Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2543 ATGCCTCCCGCGCGTCGACGCGGTGCGAATAAGGCCAAGACGAACGGTCACTTACGTTTAGGCGATCTCGTTCTTGCTAAGGTTAAAGGCTTCCCTGCTTGGCCTGCAAAGATAAGTAGGCCGGAAGATTGGGAGAAAGCCGCTGATCCTAAGAAATATTTTGTTCAGTTTTTTGGCACCAAAGAGATAGCTTTTGTTGCACCCCCAGATATTCAGGCATTTACAAGTGAGTATAAAAATAAGTTGACTGCTCGGCTTCAAGGCAAGACAAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGCTGCTTTTGATGAGATACAGAAACAGAAGAGTAGTGGTGACGACACTGATGATTCTCGGATTGGTTCAGAAGCTCCTCCTGTTGACGAGGCAGTGGGTAATTCAAAGGATACAACTGATGCTATGACGTCTGATGCAGAAAAGGATAACATTTATGGGAGTAATGTTGGCTCTAATTTGGAGGACTGTTTACCGAAAACCAGAGAGAGGGGTAACCTAGATGAAAAGCTCACTGAGTCTGGCCGTCCAAAGGAAAGTTTTTCTGGTTCAGAGATAAAGAAGAATTCTAGCAAACCTACTGTTAAAGGTGCAAGTAATGTTAATGATTTTGGTCAACATGATAACGGAAATAGTGTCTCAACAAATGGGAGTAAGCCAAGAAAGCTTCTTACTGGTTCAAAGAAGAAAAGTGAAGTTGCAGATAATAGAAACAAAAATGGTGGATCTACCGGAACACTTTTGAAGGTGGGAAATTCTACTGGAAGTGGTGATCTTTCCAGGTCGAGGGAGGCATTTAAAACTGGCAAAGGGAAAGATACATCTGCTGTTAAATCAGATTCCCCAGACACTCTTAGACCAGGGTCGAATGGTAATACTGGAGAAAAAAGTAAGAACTTAATTTCAAAAAAAGCAAGTCTTGAAGTAAAAAATGAATTACAGGAGATCATGTTTGATGCTAAGGAGTCTGATGGCAAAAACTCAATTATGGAAAAGAAGAACCAAGTTCATGCAAAGCATAATGTGGGAGCAAATGAGTCCTTACATGCTACAAAGAAGTTAAAACGCATGGATGCTAGAGATGAGTTACCTTCAGGGCACATTCCAAAAGATGTGAAAAGTCCTTTGCCTTGCTCTACTTCTGTTGAAGATAAATCATCTAAAATGTTAGAGTTGAAAAGGTCCACATCAAATTCAAAAGGAAAAAGCTCTGTCCATGAGTTGGTACCTGTGATCAAACAACATAGCCAAGTTCAAAAAACTATGCCTGATTCTGATACTATTGCTTTTGATGAGAAAAAAGAATGGAATAATCTTAAACTGAAAGGTGATACGAAGAATGTTATGACAAAACAAGTACAGAGAAAACGTAAAGCTGTTTGCCTTCATGAAGACGACGATGTACCTAAAACTCCTGTTCATGGAGGAGCTGCAAAAAATATGAAATCACCTTTTGCTACAGGGGTCAAGAAGGGAAATAATGCACATTCTGAGAAATCTGATGCTGCTTGCAGAAATTCTAGTCAACTTGAGGATGCTCATTTGAAAGAGCCATCTTCTCAATTACATAATGATACATCATCAATTAAGCATCCTGAAAAAGTGAAAGCTGATGAAGTCAATCATGTGCATGTTCCTCATAGTCATGATAAGTTAGATTCAAAGCAGTTTCCTTCTAAGGTGGCAAAAGTAAGCTCTGCCTCACCAGTAAAATCACCTCATCCAGTTCCCCCAGCAACAAAGTCAAATGCTGAGCGGAATGCTGAGCGGAGTAAATCTTCCAAACCTATGGTTAAAGCTTCCAGCATTGCTACTCAAAAGAAGGCAGATAACGGGTCTTCAAAATCTTTACTCAACCTCAGCTCTTCTCAGAACCCAGTTTCTGCTCATAAGAAGAAGCTGGCATCTTCAGCTGAAATTTCTAAGACTACTCCAAAGACATTGCCTCAGGCAGTTGACGTTCCTGTTTCAACAGTAGATTTTAAGGAGCTCGATGCACTGCATGTTGATAGATTTGAAGAGGGTATGGTAGAAAGAAGTGATATATATATTGGTTCTGGGAATTCAGAAACATCTAAAAATATGAAGCATCTGATTGCAGCTGCCCAAGCAAAATGGAAAAAAGCTCATTCTCAATATCTTTCTTCTGATATGCATCATGTTCAAGGGGGGACTCCTAGCCCCTCCACTGTTCAGCCATTTTTTTCTGTCTCAAGTAACTTCGCACAGACAGATGTGCAGGGAGTTCATGAGCACACAACTTCGGCTTCTCCACCTACTAATGAGTATCACTCTGTATCTCAAAATCAGCTCGATGCTGATGAAATTGAGGAGAGAAGAGTAGGTTCTGTGCAAAGGGGTCCTGGTGGATCGCTCAGTGGTGATACAGAGGCTGCTGTTGCCCGTGACGCTTTTGAAGGAATGATTGAAACTTTGTCAAGGACCAAGGAGAGTATTGGGCGTGCAACTCGTCTTGCCATAGATTGTGCTAAGTATGGCATTGCCAATGAGGTTGTTGAACTTCTCATCCGGAAATTGGAAAATGAAACTAGTTTTCATCGCAAGGTGGATTTATTTTTTCTTGTTGATTCTATCACTCAGTGCTCACATAGTCAAAAAGGAATTGCTGGAGCTTCTTACATCCCTATAGTTCAAGCAGCGCTGCCACGTCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAGTGCCCGTGAAAATCGTCGTCAATGTCACAAGGTTTTGAGGTTGTGGCTTGAGAGGAAAATTTTGCCGGAGTCTGTTATTCGCCGTCACATGGATGAAATTGGGGGTTCAAATGATGATATTACAGTTAGCTATAACTTCAGGCGTCCATCTCGTGCTGAGCGATCTGTGGACGACCCAATTAGAGAAATGGAAGGCATGCTCGTTGATGAGTATGGAAGTAATGCTACGTTTCAGCTTCCTGGTCTCTCTTGCCATGCGTTTGATGAAGACGAAGATGAAGATTTACAAATCAATTCTTGTACGGATATGTATGGTACATCTCCAGCTGATCCCACCCCTAAGTTTGGAGGATCAGAACCTTATACTATGACCCCAAATGACAAGCGCCATTGTATCTTGGAGGATGTAGATGGTGAGCTTGAAATGGAAGATGTTTCAGGTCACCCAAAGGATGAGAGACCTGTATATTTGAACAGTACTGATGAAACTGATATGCTTCTTCAGAGCTCAAATAGGAATTTAGACCCCACTTCAAATATTTCAGAAGACATAGTGGCTACTCCAGAGGGTTCCCCTCCATTACCTCTTGATTCACCTCCCCTGACCCCACCTTTGCCTTCTTCACCACCCCCTCCTCCTCCTCCTCCATCATCTCCTCCCCCACCCCCACCCCCTCCAATATTGCAACCCCCACCTCCTCTTCCTTTACCATCCTCAGCCCCACCAGTATTATTGGTTCCTCAATCATCTGGACTGCCCCGGCCATCACATGTCTCCCAGTCATTAATGCCACCTCAGTCATCATATCAGTCATCGCCAAAGCTGGGGTATCAGCAGAACGTACCTCATGACTTTAGTAACTCAACTAGTGGTAACCAAATAGTTCAAATGGCTGGTAATTCTTTTTCTGGAGGACACAGTAATGCAGTTATCAAGAATGAACTATATCCACAGCCATCTGCTTTTGCCCTGGCTACAGGCTCTAGCTCCCAGGAGCCCTCTGGTTTTAACCCTTCAAGACAATTAGAATATGGACAGAATGATGTGTATTTAAATGCCCAAGTCCATCAACCTAACCAGCAATATCAGCAGGGTAATGCCCCATATGCTCAGAGACATACACATCCTGCCCCACCCCAAAATCCATCAAATCAGTACTCATATCAAAATCACACAGTTCAGCAACACCTTCCACATGCATTCCATTCTCCCTTTCCTTTACCATCTCTTCCTGATGGCCGGAGGCAATTCGTTGCTGATGAGCAATGGAGAATGGCATCCACAAATAATCAACATCAAAATGGTGTATGGAGAGGGATAAATCCTTCATGCCCTGGTCCTCCCTTTGGGCAAGAAGGTTTCCGACCACCACTTGAAAGGCCACCATTAAGCAATGCAGGTTTTCAGCGAGCAATTTCAAGCACACTACCTAGTGCACCAGTATCAGGACATGGTATTCCTCAGATGTTGCCTTCCAGGCCAGACATTACTGCTGTTAATTGTTGGAGACCCACTTGA 4242 0.4298 MPPARRRGANKAKTNGHLRLGDLVLAKVKGFPAWPAKISRPEDWEKAADPKKYFVQFFGTKEIAFVAPPDIQAFTSEYKNKLTARLQGKTKYFAQAVKEICAAFDEIQKQKSSGDDTDDSRIGSEAPPVDEAVGNSKDTTDAMTSDAEKDNIYGSNVGSNLEDCLPKTRERGNLDEKLTESGRPKESFSGSEIKKNSSKPTVKGASNVNDFGQHDNGNSVSTNGSKPRKLLTGSKKKSEVADNRNKNGGSTGTLLKVGNSTGSGDLSRSREAFKTGKGKDTSAVKSDSPDTLRPGSNGNTGEKSKNLISKKASLEVKNELQEIMFDAKESDGKNSIMEKKNQVHAKHNVGANESLHATKKLKRMDARDELPSGHIPKDVKSPLPCSTSVEDKSSKMLELKRSTSNSKGKSSVHELVPVIKQHSQVQKTMPDSDTIAFDEKKEWNNLKLKGDTKNVMTKQVQRKRKAVCLHEDDDVPKTPVHGGAAKNMKSPFATGVKKGNNAHSEKSDAACRNSSQLEDAHLKEPSSQLHNDTSSIKHPEKVKADEVNHVHVPHSHDKLDSKQFPSKVAKVSSASPVKSPHPVPPATKSNAERNAERSKSSKPMVKASSIATQKKADNGSSKSLLNLSSSQNPVSAHKKKLASSAEISKTTPKTLPQAVDVPVSTVDFKELDALHVDRFEEGMVERSDIYIGSGNSETSKNMKHLIAAAQAKWKKAHSQYLSSDMHHVQGGTPSPSTVQPFFSVSSNFAQTDVQGVHEHTTSASPPTNEYHSVSQNQLDADEIEERRVGSVQRGPGGSLSGDTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHSQKGIAGASYIPIVQAALPRLLGAAAPPGASARENRRQCHKVLRLWLERKILPESVIRRHMDEIGGSNDDITVSYNFRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGLSCHAFDEDEDEDLQINSCTDMYGTSPADPTPKFGGSEPYTMTPNDKRHCILEDVDGELEMEDVSGHPKDERPVYLNSTDETDMLLQSSNRNLDPTSNISEDIVATPEGSPPLPLDSPPLTPPLPSSPPPPPPPPSSPPPPPPPPILQPPPPLPLPSSAPPVLLVPQSSGLPRPSHVSQSLMPPQSSYQSSPKLGYQQNVPHDFSNSTSGNQIVQMAGNSFSGGHSNAVIKNELYPQPSAFALATGSSSQEPSGFNPSRQLEYGQNDVYLNAQVHQPNQQYQQGNAPYAQRHTHPAPPQNPSNQYSYQNHTVQQHLPHAFHSPFPLPSLPDGRRQFVADEQWRMASTNNQHQNGVWRGINPSCPGPPFGQEGFRPPLERPPLSNAGFQRAISSTLPSAPVSGHGIPQMLPSRPDITAVNCWRPT* 1414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2543 1413 PANTHER PROTEIN HUA2-LIKE 1 1 1413 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 270 286 - -
Tpr3g2543 1413 SMART 558neu5 811 942 IPR006569 -
Tpr3g2543 1413 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1413 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 1112 1182 - -
Tpr3g2543 1413 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Tpr3g2543 1413 SMART PWWP_4 18 75 IPR000313 -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 287 307 - -
Tpr3g2543 1413 ProSiteProfiles CID domain profile. 804 945 IPR006569 -
Tpr3g2543 1413 Gene3D - 803 948 IPR008942 -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 193 229 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 601 638 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 164 192 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 1160 1182 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 108 309 - -
Tpr3g2543 1413 CDD HDGF_related 18 103 IPR035496 -
Tpr3g2543 1413 Gene3D - 10 115 - -
Tpr3g2543 1413 Pfam PWWP domain 21 104 IPR000313 -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 753 775 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 244 268 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 470 652 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 1112 1150 - -
Tpr3g2543 1413 SUPERFAMILY Tudor/PWWP/MBT 12 109 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 534 564 - -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 368 414 - -
Tpr3g2543 1413 Pfam CID domain 811 935 IPR006569 -
Tpr3g2543 1413 MobiDBLite consensus disorder prediction 109 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2543 Tpr-Chr3 24612695 24628881 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2543 - - mtr:MTR_4g075060 1981.07