Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2510 ATGGCTTCCGCATCCTCCAAAACCCTAATCGACATTTTCGATCGAGCTTCAAAGCGCTTAAAACCCACTCTCTGCAAATCCGAAGACGCCACTAATGCCTCTTCCACCCTCTCCATCGACCAAAAATCTCGAATCGAATACAATAAGAATCTCGCTTTGTCCAAAAGGAACCTCAAAATCTGCATCGATAGGGTTTCCAAACACAAAGAATCTTTAGCTTCGGGTTGCGTGAAATTAGAGGAATTGCTCGTTGAGGAATCGTGGTTGGAAGCTTTATCCGGAGAATTTCAGAAATCTTATCTTGTTAATCTTGCTAAGTTCGTCGAAACGGAGATTTGTTCGAGGGATGATTATATATATCCTCCTCAGCATTTGATTTTCAATGCTCTTAATACAACTCCTTTTCATTCTGTTAAGGCTGTGATCCTTGGTCAGGACCCTTATCATGGACCTGGTCAAGCAATGGGGCTTTCGTTTTCGGTTCCTGAGGGAGTCAAAGTTCCATCCAGTTTGGTAAATATATTTAAGGAGCTTAAGCAAGACCTTGGTTGTTCGGTTCCGTCCCACGGAAATCTTGAAAAATGGGCTGTGCAGGGCGTTCTCTTGCTTAATGCTGTTCTCACAGTCAGGAAGCACCAAGCAAATTCTCATGCAAAAAAAGGCTGGGAACAATTTACTGATGCTGTTATCAAGACAATCTCGCAGAAGAAAGAAGGGGTTGTGTTTCTGTTGTGGGGAAAATCTGCTCAGGAGAAACTTAGGTTAATTGATTCAACCAAACATCACATTCTAAAAGCTGCACATCCTTCAGGTTTGTCTGCGAATAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCAAACTAACCAACATCTGGAGCAAATGGGGATTGATCCCATAGATTGGCAACTATAA 912 0.4276 MASASSKTLIDIFDRASKRLKPTLCKSEDATNASSTLSIDQKSRIEYNKNLALSKRNLKICIDRVSKHKESLASGCVKLEELLVEESWLEALSGEFQKSYLVNLAKFVETEICSRDDYIYPPQHLIFNALNTTPFHSVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELKQDLGCSVPSHGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGKSAQEKLRLIDSTKHHILKAAHPSGLSANRGFFGCRHFSQTNQHLEQMGIDPIDWQL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2510 303 Gene3D - 65 303 IPR036895 -
Tpr3g2510 303 SMART UDG_2_a 131 291 - -
Tpr3g2510 303 TIGRFAM ung: uracil-DNA glycosylase 86 295 IPR002043 GO:0004844|GO:0006281|GO:0006284
Tpr3g2510 303 SMART UDG_2 131 291 IPR005122 -
Tpr3g2510 303 Pfam Uracil DNA glycosylase superfamily 135 288 IPR005122 -
Tpr3g2510 303 SUPERFAMILY Uracil-DNA glycosylase-like 83 303 IPR036895 -
Tpr3g2510 303 ProSitePatterns Uracil-DNA glycosylase signature. 139 148 IPR018085 GO:0006281|GO:0016799
Tpr3g2510 303 Hamap Uracil-DNA glycosylase [ung]. 85 302 IPR002043 GO:0004844|GO:0006281|GO:0006284
Tpr3g2510 303 CDD UDG-F1-like 100 301 IPR002043 GO:0004844|GO:0006281|GO:0006284
Tpr3g2510 303 PANTHER URACIL-DNA GLYCOSYLASE 27 303 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2510 K03648 - gmx:100818241 479.559