Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2496 ATGATTGACTCAAATCCACCACTCTTGAATCATTATGGAGCACTTTTGAGAAATTCAGCTGAACCTCAAAAGGCTAAAAGTTTCAATGATAAAGATAATAATACTGTGGTTGATGCTTGTGAACTACCATTGATAGACCTTAATGGTCTTAAAAGTTGTAATGTAAGAGAAAGATTAGCTTGCACTGCATCAATATGCAAGGCAGCATCAGAATGGGGATTTTTTCAAGTGATAAACCATGGTATAAACCCTGAACTACTAAGAAATATGAGGGAGGAGCAAATGAAGTTGTTTAGGGTACCCTTTGAGAAGAAGGTTACTTGTGGACTTCTAAACAATCCATACAGGTGGGGAACACCAACGGCTACTCGTTCAAATCAGTTTTCATGGTCAGAAGCTTTCCACATTCCTCTCACCATGATTTCAGAAGAAGCTTGCTGGGGTGAATTCAGTACTTTAAGAGAAGCAATAAATGAGTTTACACCAGCCATGCTAGAAGTGTCTAGGCTACTGGCAGGTATTCTAGCAGAAAACATGGGCCACCCAACAGATGCAGTTGAAAAACTCTGTGATGCAAGCACATGCTTTCTGAGGTTGAATCACTATCCTTTCTGCCCAAAATCTAAAGAAGAAATTTTTGGATTAGTGCCTCACACTGACAGTGATTTCCTCACAATTCTTTATCAAGATCAAGTTGGTGGACTCCAACTCATGAAAGATTCTAAATGGGTCGCTGTAAAACCAAATCCAGAGGCTCTTATTGTTAACATTGGAGATCTTTTCCAGGCCTGGAGTAATGATGAGTACAAAAGTGTGGAGCACAAGGTAGTGGCAAATGACAAAGTGGAAAGATACTCCATTGCATACTTCCTATGTCCTTCTTACACTACCATGATAAGTGGCTGCAAGGAACCTTCTACATATAGGAAGTTCACCTTTGGGGAATATCGACAGCAAATTCAAGAAGATGTCAAGAAAATAGGACACAAGATAGGACTGTCAAAATTTCTACATAAAGACACATACACAACGGCCACCGTTTAG 1044 0.3966 MIDSNPPLLNHYGALLRNSAEPQKAKSFNDKDNNTVVDACELPLIDLNGLKSCNVRERLACTASICKAASEWGFFQVINHGINPELLRNMREEQMKLFRVPFEKKVTCGLLNNPYRWGTPTATRSNQFSWSEAFHIPLTMISEEACWGEFSTLREAINEFTPAMLEVSRLLAGILAENMGHPTDAVEKLCDASTCFLRLNHYPFCPKSKEEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPEALIVNIGDLFQAWSNDEYKSVEHKVVANDKVERYSIAYFLCPSYTTMISGCKEPSTYRKFTFGEYRQQIQEDVKKIGHKIGLSKFLHKDTYTTATV* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2496 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 293 IPR005123 -
Tpr3g2496 347 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 330 - -
Tpr3g2496 347 Pfam 2OG-Fe(II) oxygenase superfamily 196 293 IPR044861 -
Tpr3g2496 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 136 IPR026992 -
Tpr3g2496 347 PANTHER OS02G0630300 PROTEIN 23 330 - -
Tpr3g2496 347 SUPERFAMILY Clavaminate synthase-like 36 321 - -
Tpr3g2496 347 Gene3D - 15 326 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2496 Tpr-Chr3 23966673 23969665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2496 32 318 Glycosyltransferase AT5G59530 29.870 1.49e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2496 - - gmx:100809329 598.586