Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2479 ATGGAAATGGCTTCTGATAAAACTGTGGAAACTGTAATAGTTGGAAACTATGTAGAAATGGAAAGTGAAGGAAAACCACCTCAGGACATAAAATCTAAGTTATCAAACTTCTTATGGCACGGTGGTTCTACTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTTACGTTACCATACTCATTTTCCCAGCTTGGAATGCTTTCTGGCATACTTTTTCAACTTTTCTATGGTTTACTTGGTAGCTGGACTGCTTACCTCATTAGCATACTCTATGTTGAATACAGAACAAGAAAAGAGAGAGAAAAAGTTAATTTCAGAAGCCATGTTATTCAGTGGTTTGAGGTTCTTGATGGGCTGCTAGGGAAGCATTGGAGAAATGTGGGTTTAGGATTTAATTGCACATTTCTTTTGTTTGGATCTGTTATCCAACTTATAGCTTGTGCAAGCAATATATATTACATAAATGATAATCTGGACAAGAGGACTTGGACTTACATTTTCGGAGCTTGTTGTGCCACTACTGTTTTTATTCCTTCATTTCACAACTATAGAATATGGTCCTTTTTGGGCCTTGTTATGACCACTTACACTGCTTGGTATCTTACTATTGCAGCTATACTTCACGGACAGGTGGAAGGAGTTAAGCATTCAGGTCCAAACAAAATGGTTCTATATTTTACAGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAAATAATGCATGCTATGTGGAAGCCTCAAAGGTTCAAGGCCATATATTTACTGGCTACCCTTTATGTTCTGACACTGACCCTTCCATCAGCAGTAGCAGTTTATTGGGCATTTGGTGACATGCTTCTAAATCACTCCAATGCTTTTGCTCTTCTCCCTAAATCACCCTTCCGTGACATGGCTGTCATTTTAATGCTCATTCATCAGTTTATAACATTTGGATTTGCATGCACCCCATTATACTTTGTATGGGAGAAAGCAATAGGAATGCATGAGTGCAAAAGTTTGTGCAAGCGTGCATTGGTGAGATTACCAGTTGTGATTCCAATTTGGTTTTTGGCTATTATATTCCCTTTCTTTGGACCCATCAATTCCGCCGTCGGATCTCTCCTCGTCAGTTTCACCGTTTATATCATCCCCGCCCTTGCTCACATCTTCACCTTTAAATCTTCCTCTGCTCGACAGAATGCTGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTAGGAACATTTGTTATCAATGTATTCATAGTTGTGTGGGTCCTAATTGTGGGCTTTGGATTTGGAGGGTGGGCCAGTATGGTCAATTTTGTCCACCAGATTGATACATTTGGACTCTTCACAAAATGTTACCAATGTCCTCCACCAATACCATCTCTTCCAATAATGCCACCTCATCAGCTTAACGCCACCGCGCCGGCGCCTTCGCCTCACCACCAACACCACCACTGA 1482 0.4143 MEMASDKTVETVIVGNYVEMESEGKPPQDIKSKLSNFLWHGGSTYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFEVLDGLLGKHWRNVGLGFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYLTIAAILHGQVEGVKHSGPNKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQRFKAIYLLATLYVLTLTLPSAVAVYWAFGDMLLNHSNAFALLPKSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGTFVINVFIVVWVLIVGFGFGGWASMVNFVHQIDTFGLFTKCYQCPPPIPSLPIMPPHQLNATAPAPSPHHQHHH* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2479 493 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 4 472 - -
Tpr3g2479 493 Pfam Transmembrane amino acid transporter protein 41 433 IPR013057 -
Tpr3g2479 493 PANTHER OS05G0424000 PROTEIN-RELATED 4 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2479 Tpr-Chr3 23778601 23783404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2479 6 493 Organic Solute Cotransporters AT2G21050 86.066 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2479 K13946 - gmx:100812002 915.605