Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2477 ATGGATCTACTAGCCTCCAGTTATATCACTCTCATTACTCTTCTTTTCCTCACTTCCAAAGGTGTAACTGGTTCCACCTTCACATTTGTAAACAAATGTGATTACACAGTATGGCCAGGCATTCTAGCAAATGCCGGCAGCCCATCACTCGGAAGCACCGGTTTCGAACTTCCCCAACAAACAACCCGCTCATTCCAAGCTCCAGCCGGTTGGTCCGGTCGGTTCTGGGCTCGAACCGGTTGCAACTTCGACGGATCCGGTACCGGTTCATGTCTCACCGGAGACTGTGGCTCTAACATGATAGAATGCAACGGTGCCGGAGCTGCTCCTCCAGCAACACTCGCAGAGTTCACTCTTGGAACTATAGGACAAGATTTCTACGACGTGAGTCTCGTCGACGGTTACAATTTACCGATGATTGTTGAAGGTTCGGGTGGGTCGGGTATGTGTGAATCAACTGGATGTACTTCGGATTTGAACCAGCAATGTCCGGCGGAGTTGAGAGCTTCTGATGGAAGCGCGTGTAAAAGCGCGTGTGAGGCTTTTGGTAGTCCTGAGTATTGTTGTAGTGGCGCGTATGGTTCACCGGATACTTGTAAACCTTCTATTTACTCACAGATGTTTAAGAATGCTTGTCCTAGATCGTATAGCTACGCATACGATGATGCTACGAGTACTTTTACATGTACTGCTGCGGATTATACCGTTACTTTTTGTCCATCTTCTCCAAGTAAAAAATCATCACAATATCCAACAACTCCAATGACCTCAACAACGTTACCAGGGACCTCAACAGCGTTACCAGGAACAGGGAATCCTGTGATTGGAACTGGGTCCGAAGGGGGGTCAGTGGAATACACGGGTACCGACACACCAATTGGGTATTCAGTTCCTGTGAATTCAGGGTCAGGATCCGGAGGAGAGACCATGCTAGCAGATGGGTCATATTTAGCTGGATTAGCCATGGGAGACTCATCTACAACAGCTTCATCTTCGTTTGTCTACTTTTCTGGCTTTTTGCTTATTCTCTTCTTGCTTTAG 1041 0.4755 MDLLASSYITLITLLFLTSKGVTGSTFTFVNKCDYTVWPGILANAGSPSLGSTGFELPQQTTRSFQAPAGWSGRFWARTGCNFDGSGTGSCLTGDCGSNMIECNGAGAAPPATLAEFTLGTIGQDFYDVSLVDGYNLPMIVEGSGGSGMCESTGCTSDLNQQCPAELRASDGSACKSACEAFGSPEYCCSGAYGSPDTCKPSIYSQMFKNACPRSYSYAYDDATSTFTCTAADYTVTFCPSSPSKKSSQYPTTPMTSTTLPGTSTALPGTGNPVIGTGSEGGSVEYTGTDTPIGYSVPVNSGSGSGGETMLADGSYLAGLAMGDSSTTASSSFVYFSGFLLILFLL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2477 346 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 8 265 - -
Tpr3g2477 346 Pfam Thaumatin family 31 240 IPR001938 -
Tpr3g2477 346 SMART tha2 27 240 IPR001938 -
Tpr3g2477 346 Gene3D Thaumatin 25 240 IPR037176 -
Tpr3g2477 346 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Tpr3g2477 346 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Tpr3g2477 346 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Tpr3g2477 346 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Tpr3g2477 346 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Tpr3g2477 346 SUPERFAMILY Osmotin, thaumatin-like protein 26 241 IPR037176 -
Tpr3g2477 346 PANTHER OS03G0233200 PROTEIN 8 265 IPR001938 -
Tpr3g2477 346 MobiDBLite consensus disorder prediction 249 269 - -
Tpr3g2477 346 CDD TLP-PA 26 239 - -
Tpr3g2477 346 ProSiteProfiles Thaumatin family profile. 24 240 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2477 Tpr-Chr3 23732498 23734945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2477 11 248 Receptor kinase-like Gene Family AT5G38280 47.638 4.08e-75 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2477 - - cam:101493007 578.941