Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2473 ATGGATGATCCTAACAACAACAACAAAGGTAATTCATCTCCATACGACTCTTCATCTACTTCTTCTTCTTCTTTATTATCACAACCTTTCTTATCAAAACCCTCAATCACAACAACAACAACATACCCACCAATAAAAGACCATGATTCAAACCAAGAATCTGACACAAATCAACAATACATTCACATCTCATACAATCACGGTCCTCGTTATTTCAAAGACCTACCTTTTCTCATCCTTTTTCTTCTCTTTCTTCTCTCCACTTTCGCTTTTGGAATCTTCTCAATTTTCCATAGAAACACCAATTACTCAACACTCTCTTCTTACACCTATGACAAAAACACCACCTCTTGCATCAACCCTTCACTTCCATCAACTTTTCCCACCAATTTTCTCTCTTCATCTTCACCTTTTGTCAAAGATTTAATATGGACACTTGTTATTACGTTCATTTTAAGCATACCCATGTGTTGGTCTTTGCTTCTTTTACTGAAGCATTACACCAAACACCTTGTCTACGCTTCTCTTCCTTTCTTTATTCTTATTCCTATCTTCTTAAATGTTTATTGGTTTGTTGCTTGCACTATTAAAACTTCATGTAGTGATGCTTTTCCTATGGTGTATAGAATTGTCGTGTTGGTTTTTGTTTTTTTGGTTATTGGTGTGATTGTGTGGATTCTTGTTTTGAATTGGCACCGTGTGGAACTCACTGTCAGTATAATTGGGGTTGCTTCTGATGCACTTTCTTGGAATATGGGTTTGTTTGGGGTGCTTCCTTGTTTAACTGTTGGCCTTGTTGTGTATTATGTGCCTATTGTGGTTTTTTTGGTGTTTGCTAAGTATAATGGGAAGGTCGTGCCGAAGAAATTGCATAGTGAATATGATTGTGTTTGGAAGGAGGATTCTTGGGTTCCAGCTTATTTTGCATTGGCAATACTTACTATGTTGTGGTCAGCAGCAGCTATGGTTGAAGCTCAGGTTTATGTCATTAGTGGAACTATTGCTCGTTGGTATTTCTCTAAGGATTTTGAGACTCCTACAAAGACTATTAGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGAACAATATGTTTGTCGGGATTGCTTATCTTTGTTGTTCGATTAGTGCGTTCTGTCGTTGATAATGCAAGGCAAGAAGGTGCTCCAGGGCTAGTGAACATTGTATTGCGGTGCTGTGTAAATGCCTTACTGACAGCTGTTGATTTTCTTAACAAGTTTACTATCAACTTTGCTGCAATAACCGGTGAAGCTTACTGCACATCTTCAAGGATGACATATGAACTTCTAAGACGTAACCTTCTCTCTGCTGTTTTTGTGGAGACAATATCATCTCGTCTTCTGGTTGGAATTGTTTTTGTCCTGTCAGCAATTTACACAATTGTGGCCTGTGTTATCTTAAAAGCTGCGACCAATCTCGGGTCTGATGCATATTTTGTGGCAGCGATAGCATGGCTTCTACTGATAATAGTGCTGGGTTACCTTGTGCATGTGCTCGACAATGTAATTGACACAATTTATGTCTGCTATGCCATAGACAGGGACAGAGGAGAGGTTTGTAAACAAGACGTTCACGAAGTTTACGTTCACCTACCCATAAGTAGAAGTCTTAGACAATCTAATATTACAAGAACTCTAGGTGTATAA 1671 0.3842 MDDPNNNNKGNSSPYDSSSTSSSSLLSQPFLSKPSITTTTTYPPIKDHDSNQESDTNQQYIHISYNHGPRYFKDLPFLILFLLFLLSTFAFGIFSIFHRNTNYSTLSSYTYDKNTTSCINPSLPSTFPTNFLSSSSPFVKDLIWTLVITFILSIPMCWSLLLLLKHYTKHLVYASLPFFILIPIFLNVYWFVACTIKTSCSDAFPMVYRIVVLVFVFLVIGVIVWILVLNWHRVELTVSIIGVASDALSWNMGLFGVLPCLTVGLVVYYVPIVVFLVFAKYNGKVVPKKLHSEYDCVWKEDSWVPAYFALAILTMLWSAAAMVEAQVYVISGTIARWYFSKDFETPTKTIRTSLRNAFGPSSGTICLSGLLIFVVRLVRSVVDNARQEGAPGLVNIVLRCCVNALLTAVDFLNKFTINFAAITGEAYCTSSRMTYELLRRNLLSAVFVETISSRLLVGIVFVLSAIYTIVACVILKAATNLGSDAYFVAAIAWLLLIIVLGYLVHVLDNVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSNITRTLGV* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2473 556 MobiDBLite consensus disorder prediction 1 32 - -
Tpr3g2473 556 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 59 537 IPR007603 GO:0022857|GO:0055085
Tpr3g2473 556 PANTHER CTL-LIKE PROTEIN DDB_G0288717 59 537 - -
Tpr3g2473 556 Pfam Plasma-membrane choline transporter 215 523 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2473 - - gmx:100801313 756.518