Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2471 ATGGCGATGGCTTTCAAAATGGCTACTACTGGGATGTGGGTAACAGATGAGTGCAAGAATTCATTCATGGAGATGAAGTGGAAAAAGGTACATAGATACATAGTTTTCAAGATCGATGAAAGGTCAAGGCTTGTGACCGTTGATAAGGTTGGTGGTCCTGGAGAAAACTATGGTGATCTTGCTGCTTCTTTGCCTAAAGATGATTGTAGATATGCTGTCTTTGATTTTGATTTTGTCACTGTTGATAACTGCCGCAAAAGCAAGATCTTCTTCATTGCATGGTCACCAGCAGCATCAAGGATAAGAGCAAAGATTCTATACGCAACATCAAAGGATGGGTTGAGAAGAGCTTTGGATGGAATCTCTTATGAGCTTCAAGCAACTGATCCAACTGAGATGGGATTTGATGTAATTCAAGACAGAGCAAAATAG 432 0.4051 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDERSRLVTVDKVGGPGENYGDLAASLPKDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPAASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIQDRAK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2471 143 SMART adf_2 16 143 IPR002108 GO:0003779
Tpr3g2471 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
Tpr3g2471 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Tpr3g2471 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Tpr3g2471 143 Gene3D Severin 2 143 IPR029006 -
Tpr3g2471 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
Tpr3g2471 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Tpr3g2471 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2471 Tpr-Chr3 23641046 23642466 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2471 K05765 - gmx:100801857 285.419