Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2467 ATGTCTCAAAAAACATCATCGTTCTACCCACAAGTTGAATCCACCAACCCAGACGCAAACACAACACAACCACAAGAACATGTTCTTGTTACTGTCCCAAACGTGATTCTTCATCTCATACAAAAAGACTCAAGCGTCCACTTAGCTTCTGGTGACTTAACCATAGTAAATCTCAAAGAAGAGGAAAAAGTCATAGCAGTTCTTGCTCGCATAGGTCATCAAATCCAATGGCCATTAGCCAAAGACGTTTCAACACTAAAACTCGACGAATCCCATTATTTTTTCACACTTCAGATTCCAAAGAGTGATAAAACAGAGAACGAGGATGATGTTTTAAACTACGGAATGACGGTTGAAACAAATGGGTCAGAGAAATTTTCAATTTTGAAGAAACTTGATGAAGTTCTTGACAAGTATAGTTTTTTTTCGGTGGAAAAAGTGAAGGGTGTTAAAGGGTGGGAAGTTTTGGAGAAAAAGGAAGTTGTTGAGGAAAGTTCTGCTGCTGCTTATTGGACAACGTTGGCACCAAACGTGGAAGATTATAGTGGAAGATTTGCAAGATGGATTGCTGCTGGTTCAGGACAAATGATTAGAGGAATTTTGTTTTGTGGTGATGTTACTGTTGATAGATTGAAATGGGGGAATGATTTCATGAAGAAAAGGTTGCAACCTGGTTCTTCTCAATCACAGATTAGTCCATATGCTATGGAGAGTATGAAAAGTGTTAAGAAGTTGACAAAAATGTCAGAGAAAGTGGCTCTTGGTGTTCTATCTGGTGCTGTTAAGGTGTCTGGATTCTTTACTAGTTCTGTTGTGAACTCTAAACCTGGGAAAAAATTCTTTAGTCTTCTTCCTGGAGAAATTGTACTTGCTAGCCTTGATGGATTCAATAAGGTATGTGATGCTGTAGAAGTAGCTGGAAGGAATGTTATGTCTACTTCATCAGTTGTGACTACTGGACTAGTTTCACATAAATATGGAGAAAAAGCAGGTGAGATTACAAATGAAGGACTTGATGCTGCAGGACATGCATTTGGTACAGCTTGGGCTGTGTTTAAACTCAGGAAGGCACTTAATCCTAAGAGTGTGATCAAACCAACAACAATAGCTAAAGCTGCTGCACAAGCAACTTCTGCTCAACTCAAGGCTAAGAAATAA 1158 0.3895 MSQKTSSFYPQVESTNPDANTTQPQEHVLVTVPNVILHLIQKDSSVHLASGDLTIVNLKEEEKVIAVLARIGHQIQWPLAKDVSTLKLDESHYFFTLQIPKSDKTENEDDVLNYGMTVETNGSEKFSILKKLDEVLDKYSFFSVEKVKGVKGWEVLEKKEVVEESSAAAYWTTLAPNVEDYSGRFARWIAAGSGQMIRGILFCGDVTVDRLKWGNDFMKKRLQPGSSQSQISPYAMESMKSVKKLTKMSEKVALGVLSGAVKVSGFFTSSVVNSKPGKKFFSLLPGEIVLASLDGFNKVCDAVEVAGRNVMSTSSVVTTGLVSHKYGEKAGEITNEGLDAAGHAFGTAWAVFKLRKALNPKSVIKPTTIAKAAAQATSAQLKAKK* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2467 385 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g2467 385 PANTHER OS06G0717100 PROTEIN 4 384 - -
Tpr3g2467 385 Pfam Senescence domain 187 374 IPR009686 -
Tpr3g2467 385 PANTHER SPARTIN 4 384 IPR045036 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2467 Tpr-Chr3 23599297 23601429 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2467 K19366 - gmx:100802385 487.648