Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2449 ATGGGTGCTTTAGATCACATCTCTGATTTCTTTGACTGTTCTTATAGAAGCTCCAAATACAAGAAGAAGCTCAAGCAATTTCAGACAGTGGAGGTGAAAGTGAAGATGGATTGTGAAGGTTGTGAGAGAAAAGTGAAGAAGTCAGTAGAAGGAATGAAAGGGGTAACACAAGTGGAAGTAGATCGTAAAGCAAACAAAGTAACCGTTACAGGTTACGTGGAACCATCTAAGGTGGTAAATCGCATGTCTCATCGTACGGGTAAAAGAGTTGAGTTATGGCCTTATGTTCCATACGACGTCGTTGAACACCCCTATGCTCCTGGTGTTTATGATAAAAAAGCACCTTCTGGTTATGTTAGAAATGCTAATTATGATCCTAATGTTTCTAATCTTGCTCGTGCTAGTTCTGCTGAAGTTAGATATACTACTGCTTTTAGTGATGAAAATCCCACCGCATGTGTTGTTATGTGA 471 0.397 MGALDHISDFFDCSYRSSKYKKKLKQFQTVEVKVKMDCEGCERKVKKSVEGMKGVTQVEVDRKANKVTVTGYVEPSKVVNRMSHRTGKRVELWPYVPYDVVEHPYAPGVYDKKAPSGYVRNANYDPNVSNLARASSAEVRYTTAFSDENPTACVVM* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2449 156 CDD HMA 31 91 IPR006121 GO:0046872
Tpr3g2449 156 SUPERFAMILY HMA, heavy metal-associated domain 27 93 IPR036163 GO:0046872
Tpr3g2449 156 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 156 IPR045181 GO:0046872
Tpr3g2449 156 Gene3D - 13 94 - -
Tpr3g2449 156 Pfam Heavy-metal-associated domain 32 88 IPR006121 GO:0046872
Tpr3g2449 156 ProSiteProfiles Heavy-metal-associated domain profile. 36 83 IPR006121 GO:0046872
Tpr3g2449 156 PANTHER HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2449 Tpr-Chr3 23413486 23415340 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2449 - - gmx:547973 272.707