Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2448 ATGGCGAAGAAACCTGCACCAAGATCCAGTAAATTATCCGTCTACCTTTACGTTCCTAATATCATTGGATACATCCGGGTGCTTTTGAACTGTCTTGCCTTCTCTTTATGTTTAAGAAACAAAATCATTTTCCCTATTCTATACTTTTTCAGTTTTGTGTGCGATGCCGTGGATGGCTGGTGTGCTCGAAGATTCAATCAAGTGTCAACATTTGGAGCTGTGCTGGATATGGTAACAGACAGGATTAGCACTGCTTGTCTTCTTGTAGTTCTATCCCAATTATACAAGCCTGGCCTGGTCTTCTTGTCATTGCTCGCCTTAGACATTGGCAGCCACTGGTTTCAAATGTACAGCACTTTCTTGGCTGGCAAGGCTAGTCATAAAGATGTGAAGGACAGCACCAACTGGCTTTTTAGGGCATATTATGGAAATAGGATGTTTATGGCATACTGTTGTGTCTCATGTGAGGTTCTTTACTTAATATTGTTTTATCTTGCGGAGAATCAAACAGAGACATTGGCGGATGTTTTATCAAGTAATTTACAAAAGATAACACTAATCTCTTTCCTAATTGGCACAAGTTTATTTGGATGGGCAACCAAGCAAATTATAAATGTTATTCAGATGAAGACAGCAGCAGACATGTGTGTTCTTTATGACATTGACAAAAAACACAAGCACTGA 684 0.3947 MAKKPAPRSSKLSVYLYVPNIIGYIRVLLNCLAFSLCLRNKIIFPILYFFSFVCDAVDGWCARRFNQVSTFGAVLDMVTDRISTACLLVVLSQLYKPGLVFLSLLALDIGSHWFQMYSTFLAGKASHKDVKDSTNWLFRAYYGNRMFMAYCCVSCEVLYLILFYLAENQTETLADVLSSNLQKITLISFLIGTSLFGWATKQIINVIQMKTAADMCVLYDIDKKHKH* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2448 227 Pfam CDP-alcohol phosphatidyltransferase 17 116 IPR000462 GO:0008654|GO:0016020|GO:0016780
Tpr3g2448 227 Gene3D - 6 196 IPR043130 -
Tpr3g2448 227 PANTHER PHOSPHATIDYLINOSITOL SYNTHASE 5 226 - -
Tpr3g2448 227 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 58 80 IPR000462 GO:0008654|GO:0016020|GO:0016780
Tpr3g2448 227 PIRSF CDP_diag_ino_3_P 1 227 IPR014387 -
Tpr3g2448 227 PANTHER CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 1 5 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2448 Tpr-Chr3 23400862 23407009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2448 1 226 Lipid Metabolism Gene Families AT1G68000 73.894 9.81e-130 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2448 K00999 - gmx:100797963 410.609