Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2427 ATGGGTTTCCGCATAGCCGGTATTCTCAAAAGGGCATCATCATTTTCCAAAACACAAGGATCTACCAAGGGACTTGAAATCCCAAAAGGCTATCTTGCAGTCTATGTTGGAGATCAAATGAGACGGTTCGTGATTCCAGTGTCATACTTGAACCAACCGTTGTTTCAAGAGTTACTAAATCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTAACAATTCCGTGCAACGAGGAAGAATTCCTAAACCTCACTTCTCGCTTGAATTAA 279 0.4158 MGFRIAGILKRASSFSKTQGSTKGLEIPKGYLAVYVGDQMRRFVIPVSYLNQPLFQELLNQAEEEFGYDHPMGGLTIPCNEEEFLNLTSRLN* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2427 92 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 92 - -
Tpr3g2427 92 Pfam Auxin responsive protein 12 90 IPR003676 GO:0009733
Tpr3g2427 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2427 Tpr-Chr3 23094374 23094973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2427 9 84 Calmodulin-binding Proteins AT3G43120 51.282 3.61e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2427 K14488 - gmx:100786095 156.377