Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2426 ATGCCCAATACCTCATCTTCCAAAAAGCACTGTCAAGATCAGCCTCAATTAAGTGGTCCCATTCCTAAATCTCATATGGCCAAATCTGAAGAAAATAAAAAGAACTCGGGTAAGAAACTCAAAGATGTAGAAATAAGTGTTCCGATAGTGTATGGGAACATAGCATTTTGGCTTGGCAAAAAAGCTAGTGAGTATCAATCGCATAAGTGGACTATATATGTTCGTGGAGCATCCAATGAGGACTTGGGGGTTATTATAAAGCGTGTTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCATGAGGGTTGTGGATGCACCTCCTTTTGAGTTGTCAGAGGCCGGATGGGGAGAATTTGAAATTGCCATCACACTTTATTTCCACAGTGATGTCTGCGACAAGCCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCCACAAAGAAGCCTGTTGTTGTGGAACTTTATGATGAGATAGTTTTCCCTGATCCCTCCGAAGCTTTTTTAGCTCGTGTGCTGAATCACCCAGCTGTGCACTTGCCAAGATTACCTGCTGGGCTTACCTTGCCTCCTCCCATTCCCGTCGAAGATGCGAGTAAAAGGAGGAAAGGTGATACCAAAGATAATCCCTTAAGCCAATGGTTCCTCAATTTCTCAGAAGCAGATGAACTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTTCAAAACTCAAACGACAGATAAGTTTGATTGAAGGACAACATAAGCAGCTTAAATCTTCTTCTGACCAATAG 810 0.4185 MPNTSSSKKHCQDQPQLSGPIPKSHMAKSEENKKNSGKKLKDVEISVPIVYGNIAFWLGKKASEYQSHKWTIYVRGASNEDLGVIIKRVVFQLHSSFNNPMRVVDAPPFELSEAGWGEFEIAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVELYDEIVFPDPSEAFLARVLNHPAVHLPRLPAGLTLPPPIPVEDASKRRKGDTKDNPLSQWFLNFSEADELLQLAAARQQVQAHISKLKRQISLIEGQHKQLKSSSDQ* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2426 269 MobiDBLite consensus disorder prediction 1 19 - -
Tpr3g2426 269 ProSiteProfiles YEATS domain profile. 39 183 IPR005033 GO:0006355
Tpr3g2426 269 Gene3D YEATS domain 40 192 IPR038704 -
Tpr3g2426 269 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 17 267 - -
Tpr3g2426 269 Coils Coil 232 266 - -
Tpr3g2426 269 MobiDBLite consensus disorder prediction 1 37 - -
Tpr3g2426 269 CDD YEATS_TFIID14_like 45 176 - -
Tpr3g2426 269 PANTHER YEATS DOMAIN 17 267 IPR005033 GO:0006355
Tpr3g2426 269 Pfam YEATS family 67 146 IPR005033 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2426 Tpr-Chr3 23087226 23091897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2426 K11341 - gmx:100790602 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2426 3 23087226 23091897 Tpr3g2426 3 23087226 23091897 ECH