Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2390 ATGGCTTCTGCATCAGCATCTCTTTTCAAATCATCACTTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAAACCCTCCGTCAACCTATGTCCGTTGTGAGATGCAGCCCCGCCGCTCCATCAAGTCTCACCATCAGAGCTGGTGCTTATACTGACGAGCTCGTCAAGACCGCGAAAACAATTGCTTCACCAGGGCGTGGTATTTTGGCCATGGATGAGTCCAATGCTACATGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGTCAAGCATGGCGTACCCTTTTGGTGACAGTTCCATCACTTGGAGAGTACATCTCTGGTGCCATTCTATTTGAGGAAACTCTCTACCAATCCACAGTTGATGGAAGGAAGATTGTCGATGTGCTTGTTGAGCAAAACATTGTTCCTGGTATTAAAGTCGACAAGGGTCTGGTGCCTCTTGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTAGACGGCCTTGCCTCTCGTTCAGCTGCATACTACCAACAAGGTGCTCGTTTCGCAAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTTTGGCTGTCAAGGAAGCAGCCTGGGGTTTGGCTCGCTATGCTGCAATTAGTCAGGACAACGGGTTGGTCCCAATTGTGGAACCGGAGATCTTGCTTGATGGAGAACATAACATTGACAGGACCTTTGAAGTAGCCCAAAAGGTTTGGGCTGAGGTTTTCTACTACCTTGCTGAGAACAATGTCCAATTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCCGGAGCCGAGTCCAAGGACAGGGCCTCTCCTGCAACAGTTGCCGACTATACCCTCAAACTCCTTCAAAGGAGAATTCCCCCAGCTGTCCCTGGAATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGAAATGAACAAATCACCAAACCCATGGCACGTGTCGTTTTCATACGCAAGAGCTCTCCAAAATACTGCATTGAAGACATGGGGAGGCCGCATAGAGAATGTGAAGGCAGCACAAGAAGCACTCCTTCACCGCGCCAAGTCCAACTCACTTGCTCAACTTGGGAAGTACGCCGGTGATGGTGAATCTGAGGAAGCCAAGAAGGAACTATTTGTCAAAGGCTACGTTTACTAA 1194 0.4891 MASASASLFKSSLVLDKSEWVKGQTLRQPMSVVRCSPAAPSSLTIRAGAYTDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPSLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHNIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDRASPATVADYTLKLLQRRIPPAVPGIMFLSGGQSEVEATLNLNEMNKSPNPWHVSFSYARALQNTALKTWGGRIENVKAAQEALLHRAKSNSLAQLGKYAGDGESEEAKKELFVKGYVY* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2390 397 SUPERFAMILY Aldolase 43 397 - -
Tpr3g2390 397 CDD FBP_aldolase_I_a 52 377 - -
Tpr3g2390 397 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 258 268 IPR029768 -
Tpr3g2390 397 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 25 397 IPR000741 GO:0004332|GO:0006096
Tpr3g2390 397 Gene3D Aldolase class I 34 396 IPR013785 -
Tpr3g2390 397 Pfam Fructose-bisphosphate aldolase class-I 53 397 IPR000741 GO:0004332|GO:0006096
Tpr3g2390 397 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 25 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2390 Tpr-Chr3 22663409 22667962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2390 50 397 Miscellaneous Gene Families AT3G52930 55.682 3.21e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2390 K01623 - gmx:100818383 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2390 3 22663409 22667962 Tpr3g2390 3 22663409 22667962 ECH