Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2387 ATGGAGGATGTCCTTACACTGACTTGCCAATCTTGTAACTATGAGGATGAAGTTGTGGAATTGGATGGCTTTTACTACTGCAGGAGCTGCGGACAGCAGAATCTTGATGTTGTCGACACTGGTGCCGAAGATGGAGAAGGGATCGGAGTCGGCGGTATCTACTTGGCCAAGCACAAACGCCGTGTATATGCTTCTTCTGAGGCAATTAATGTGCCATTCTCGACACCCAAAGATTTTGGCTCGAAAGGTGTAAAATTTGACGTCTACATCAAGGAAATAAGGTTGCGGTACATTATGGGGTTGCAGATAATGATGGAGCTTCAATGTGAAGCACTGGTGAAGGAGTTTAAGGTTACTCCTTTAATATGTGGCTTGGTTGGACCAATTTGGTTGAGACTTGTCTCCAAGACTGGTGTTTTCGACGATGATTGGGCAGATAAAAAATTTCACGACTCTCACTTGCAGAAAGAAGGAGAATCAGAAGGCAAAAACAAATTAGGACCTCACCATATATTTAGGTCTTTAAAGAATAGGATTCCTCTAGTGTGTACTATTGTTGTTTCATATTTAGCATGTCACATTGCCAGGGAAGCAATCATGCCATCAGACATGATTAAGTGGGCACGCGAAGGAAAACTTCCATATTTTTCTGCTTTTGTCGAAGTCGAAAGGAAAATGGGACACCCAACAATTGCATGTCCTATCAGTTCAAGTTATATGTTCAGGCCTCAGCGAGCTCTTTCAGTACATAAACTAGAGTCACATGCTTCATCCCTTGCTCAATTTATAGGCTTGCAGTTACCTCCCGTGAACTTTTATGCATTAGCTTATCGTTATCTTAAAAAGTTATCTCTTCCTGTTGAAAAGATTCTTCCGTACGCATGCCGCATTTATGAATGGTCGATGTCTCCAGATTTATGGTTATCCTTATCCAAGGATTATTTTGGGCTACCTACTCATGTTTCTGTTGTATCGGTTTTGGTAGTAGCAATAAGGATTTTGTATAACATTAATGGTTATGGAGTGTGGGAGAAAAGTTTATCTTATAATGACAGTGCCAAAGATTCAACTAAAGATCCAAAAGAACATAAACAACGCGAATTGGATTGTACCGGGCTTCTCCAACACCTTCAAGGAATATATATCGAGATTGCAGACACCCATGAGTATTCCAAGAACTTACCTACATATCTCAAATATTGTAAGGATGTTGTGTTTGCTGGATTAGAACCATCTTATGGGAGTCATGAAGAAGAAAATATGATGGAAAACCTATGGAAACATTATCAAAATGAAGAGAATACTAAACCATCTGAACCAGGAAAGCAACACAATACTTCTTTTAACCGACGGCTTATGACAAACTCTCATGATGATAATTTCTACGAGAGTTTGTCAGAAACCATCGGAAAATTGAAATTGGATATGGAGGAAAATAGATTTTGTTACATAGCACCTAGTGTTAAGCAGAAACAACTGGATTATGTTCACTATATAAGAAAGAAGGATAAAGGTGGTCTGTCCTATGTTGCTCATGCTGATTATTACATTTTGCTTCGAGCTTTTGCTAGAATTGCATATGATGATGACATTCGGATTTTGCATATTGGTGTTTTGAACCTTGAAAGAAGACTTGCTTGGTTGGAGAAACGGATTGGTCAATGCTTGCATTTGAAACCTTCCAATGTTTCTTGTCAGTTTTGTAGTGTTAGGGCCACTGATAATGGATCAGGTGATGGATCTTAA 1746 0.3923 MEDVLTLTCQSCNYEDEVVELDGFYYCRSCGQQNLDVVDTGAEDGEGIGVGGIYLAKHKRRVYASSEAINVPFSTPKDFGSKGVKFDVYIKEIRLRYIMGLQIMMELQCEALVKEFKVTPLICGLVGPIWLRLVSKTGVFDDDWADKKFHDSHLQKEGESEGKNKLGPHHIFRSLKNRIPLVCTIVVSYLACHIAREAIMPSDMIKWAREGKLPYFSAFVEVERKMGHPTIACPISSSYMFRPQRALSVHKLESHASSLAQFIGLQLPPVNFYALAYRYLKKLSLPVEKILPYACRIYEWSMSPDLWLSLSKDYFGLPTHVSVVSVLVVAIRILYNINGYGVWEKSLSYNDSAKDSTKDPKEHKQRELDCTGLLQHLQGIYIEIADTHEYSKNLPTYLKYCKDVVFAGLEPSYGSHEEENMMENLWKHYQNEENTKPSEPGKQHNTSFNRRLMTNSHDDNFYESLSETIGKLKLDMEENRFCYIAPSVKQKQLDYVHYIRKKDKGGLSYVAHADYYILLRAFARIAYDDDIRILHIGVLNLERRLAWLEKRIGQCLHLKPSNVSCQFCSVRATDNGSGDGS* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2387 581 PANTHER TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B 7 570 IPR033599 GO:0001164|GO:0001188|GO:0006360|GO:0070860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2387 Tpr-Chr3 22647704 22651670 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2387 - - mtr:MTR_4g057650 867.455