Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2376 ATGGTCCTTCTTTCACTACATTTGAATCACACTTCTCTCCTCAAAAACCCCAATCTCATTTCACACTCAAACCGCCACTTACCTCTTCAGTTCCTTGCACCTTCTCTTCTCAAGAACACGGCCATCAATTCAACATACCAATGCATTACATCCCCGAAACACCGTCGATTCAGGATCATAACAGCTTGTGTAGCTCAAAACCATGACATCATAGATGAATCCGAAGACAGAGACCAAATCAGCAAGACTTCTCAAGAAGAAGAAGTGGAGGAACTGGTTGAGCAGAGTTTATGGATTCAAATGAAGGAGATTGTTTTGTTTACTGGACCTGCAATTGGACTTTGGTTATGTGGACCGTTGATGAGTCTAATTGATACTGCGGTTGTTGGTCAAGGAAGTTCAATAGAGCTAGCTGCTTTAGGTCCTGCTACTGTATTTTGCGATTACTTGAGCTACTCGTTCATGTTTTTGTCGATTGCTACTTCAAATATGGTTGCTACTGCCCTTGCTAGACGGGATAGGGAGGAAGTGCAGCATCACATATCTGTCTTGCTTTTTGTTGGGTTAACATGTGGTTTGGTGATGCTTGTGTTCACAAGGTTATTTGGTGCAACAACGATCACAGCTTTTACTGGACCAAAGAATGTACATATAGTACCTGCAGCTAATACTTATGTCCAGATTCGAGGGTTGGCATGGCCATTTTTACTTGTTGGATCGGTTGCTCAAAGTGCAAGTCTTGGTATGAAAGATTCTTGGGGACCCTTGAAGGCTTTGGCTGCTGCCAGTATTATAAATGGAATTGGTGATATAATTCTGTGCCGATACTACAGCTATGGGATTGCTGGGGCTGCATGCGCTACATTAGCATCACAAGTTGTTGCTGCCTATATGATGAGCCAAACTCTAAATGAGAAGGGATACAATGCCTTTTCCTTCTCTATTCCTTCGGGGAAGGAATTTCTGTCAATATTTAGTCTTGCTGCTCCTGTATTTGTGTCATTGATGTTAAAGGTGGCTTTCTACTCTCTACTTATATATTTTGCCACATCAATGGGTACACATAAAATAGCCGCTCATCAAGTCATGCTTCAGATCTACATGTTATGCGCAATATGCGGTGAACCTCTCTCTCAAACTGCTCAATCATTTATGCCTGAGATGATGTATGGAGTGAATCGGAGTTTGGCAAAGGCTCGGACGCTTCTAAGGTCTATTTTAACTATTGGAGCTGTATTTGGGTTGCTTTTTGGGATTGTTGCAACATCTGTTCCTTGGTTATTCCCCTACATTTTTACACCTGATCAGATGGTCATCCATGAGATGCATAGGATTCTGATTCCGTTCTTTTTAGCGCTCTTGGTGACACCTGCAACTGTCGGCCTGGAGGGAACATTGCTGGCTGGACGGGATCTAAGATTTTTAAGTTTGTCAATGAGTGGATGCTTTTGCTTGAATGCTCTAGTATTATTGATCCTTTGTAGTAGATATGGTTTGCAAGGCTGTTGGTTTTCCCTTGCTGGGTTTCAATGGGCTCGGTTTTTAGCAGCCCTTCTACGCCTTCTATCTCCCAATGGCATTTTATACTCGGAAGATATAAGCCAGAATGAGGTGCAAGAGTTGAAGACTGCATAG 1635 0.4251 MVLLSLHLNHTSLLKNPNLISHSNRHLPLQFLAPSLLKNTAINSTYQCITSPKHRRFRIITACVAQNHDIIDESEDRDQISKTSQEEEVEELVEQSLWIQMKEIVLFTGPAIGLWLCGPLMSLIDTAVVGQGSSIELAALGPATVFCDYLSYSFMFLSIATSNMVATALARRDREEVQHHISVLLFVGLTCGLVMLVFTRLFGATTITAFTGPKNVHIVPAANTYVQIRGLAWPFLLVGSVAQSASLGMKDSWGPLKALAAASIINGIGDIILCRYYSYGIAGAACATLASQVVAAYMMSQTLNEKGYNAFSFSIPSGKEFLSIFSLAAPVFVSLMLKVAFYSLLIYFATSMGTHKIAAHQVMLQIYMLCAICGEPLSQTAQSFMPEMMYGVNRSLAKARTLLRSILTIGAVFGLLFGIVATSVPWLFPYIFTPDQMVIHEMHRILIPFFLALLVTPATVGLEGTLLAGRDLRFLSLSMSGCFCLNALVLLILCSRYGLQGCWFSLAGFQWARFLAALLRLLSPNGILYSEDISQNEVQELKTA* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2376 544 CDD MATE_DinF_like 100 511 IPR044644 -
Tpr3g2376 544 TIGRFAM matE: MATE efflux family protein 110 503 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr3g2376 544 Pfam MatE 116 268 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr3g2376 544 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 51 533 IPR044644 -
Tpr3g2376 544 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 51 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2376 Tpr-Chr3 22564413 22571565 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2376 K03327 - gmx:100778835 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2376 3 22564413 22571565 Tpr3g2376 3 22564413 22571565 ECH