Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2370 ATGTTAGGCGCCATTTCAGTAACCCACCCAGCAAGCACAACTTTATCATCTTGGACATATAGTCGAACATCTGGAAACAGATTATTTTTATCAGGTTACAAACCAAGGACAGTATCAATGTCTCTCAGTAACAACAGAAGTAGTAATAAGAAGCAGCTAGAAGGTGAAAGCCTCTATCTTGGCTTGGACTTTGGTACTTCCGGTGCTAGATTTGCCATTATTGACATTGTTGGTACAATTCAAGCCGAGGCAAAGAGAAATTATCCGATATATTTGAATGGAGAGTCACGTGATTGGGCACGCTCATGGAAGGAGACACTCTTTTTGTTGCTTGAAGATATTCCACTTAACCTTCGCAAGCATATTGTATCCATTTCTATTGACGGAACATCTGCAACTACTATGATTGTTGACAGTGATACAGGAGAACCGCTGTGGAGACCTTTACTTTACAATGAAAGTTGTCCTGATGCACTACCTGCTGTAAAATCCATTGCCCCTCCAAACCATACAGTATGCACTGCATCCTCCACTCTGTGTAAGCTCGTCTCATGGTGGAATCAGGAGGGTTCAAACCAAAAATCTGCTCTGTTGTTGCACCAAGCAGATTGGCTTTTGTGGCTTCTTCATGGAAAGCTTGGAGTTTCAGATTATAATAATGCTTTGAAGGTTGGATATGATCCTGAAGTGGACTCATATCCATCATGGCTAGTCTGTCAACCATATTCTCATCTTTTACCTTCAGTTGTTGCACCAGGAACTCCAATTGCTTGTTTGAAGGAGGAACTTAGAAATAAATTTGGTTTCCAAAAAGAGTGTGTTGTATGCAGCGGAACAACTGACAGTATAGCTGCATTTCTTGCGGCCCGTGCTACTCAACCTGGAAAAGCTGTCACTTCATTGGGTTCAACACTTGCTATTAAACTATTAAGCAACACAAGAATTGAAGATTCTCGGTTTGGGGTGTATAGTCATCGCCTTGATGATAAATGGCTTGTTGGCGGTGCTTCAAACACTGGCGGCGTTGTTCTTAGACAGATATTCACCGATGATCAATTAGAGAAACTGAGTGAACAAATCAATCCCTCACAAATATCTCTTCTGGACTACTATCCTCTGCCAAAAGCTGGTGAAAGATTTCCAATTGCAGATCCAGAGTTGGCTCCAAGGCTACTTCCACGTCCAGAAAATGATGTTGAATACTTGCATGGGATTTTGGAATCCATTGCACGTATAGAGGCAAAGGGATATGGGTTGCTAAAGGAGCTAGGTGCAACTGAGGTTGATCAAGTTTTCACAGCCGGTGGAGGAGCAAAAAATGAGAAGTGGACAAAGATACGGGAGAGGGTGTTGGGGTTACCTGTGAGTCGTGCAGATCAAACAGAAGCTGCATATGGAACTGCATTGTTGGCAATAAAGGGTGATCAACAAAACATTTTGTGA 1443 0.4227 MLGAISVTHPASTTLSSWTYSRTSGNRLFLSGYKPRTVSMSLSNNRSSNKKQLEGESLYLGLDFGTSGARFAIIDIVGTIQAEAKRNYPIYLNGESRDWARSWKETLFLLLEDIPLNLRKHIVSISIDGTSATTMIVDSDTGEPLWRPLLYNESCPDALPAVKSIAPPNHTVCTASSTLCKLVSWWNQEGSNQKSALLLHQADWLLWLLHGKLGVSDYNNALKVGYDPEVDSYPSWLVCQPYSHLLPSVVAPGTPIACLKEELRNKFGFQKECVVCSGTTDSIAAFLAARATQPGKAVTSLGSTLAIKLLSNTRIEDSRFGVYSHRLDDKWLVGGASNTGGVVLRQIFTDDQLEKLSEQINPSQISLLDYYPLPKAGERFPIADPELAPRLLPRPENDVEYLHGILESIARIEAKGYGLLKELGATEVDQVFTAGGGAKNEKWTKIRERVLGLPVSRADQTEAAYGTALLAIKGDQQNIL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2370 480 PANTHER SUGAR KINASE 57 477 - -
Tpr3g2370 480 Pfam FGGY family of carbohydrate kinases, C-terminal domain 360 472 IPR018485 GO:0005975|GO:0016773
Tpr3g2370 480 PANTHER D-RIBULOSE KINASE 57 477 - -
Tpr3g2370 480 Pfam FGGY family of carbohydrate kinases, N-terminal domain 58 287 IPR018484 GO:0005975|GO:0016773
Tpr3g2370 480 Gene3D - 55 284 - -
Tpr3g2370 480 SUPERFAMILY Actin-like ATPase domain 58 286 IPR043129 -
Tpr3g2370 480 Gene3D - 285 477 - -
Tpr3g2370 480 SUPERFAMILY Actin-like ATPase domain 293 473 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2370 Tpr-Chr3 22498801 22505782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2370 K22935 - gmx:100779892 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2370 3 22498801 22505782 Tpr3g2370 3 22498801 22505782 ECH