Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2368 ATGGCCTCGTCTTCACGAGCAAGGAGCAACTCGCCGTTTTCTCACCGGAAACCTGTCACACCTTACTCCTCCGCTTCTTCCTTCACCGCCGCAAAGTTAATGCCACGCTCTTGCTCTTCTTCTGCCTCTTCTTTTTTCAACTCCGGTGGTACGCCTGAAGTCAGTTCCCGATCCATAGCTCCGAGTCGCGGTGGTCAAAGTGAGTCAACTTATTTCGACGCACAAGGTTATGGTTCTCCAATGGAGGAGGTAATTGCGGAGTCTATTGTTTCTTCCACGCCTCGAGATAGCATTTCGGTGACGATTCGGTTTAGACCGTTGAGTGAAAGAGAGTATCAGAGAGGGGACGAGATCGCGTGGTATGCAGATGGTGATAAGATTGTGAGGAATGAGTTTAATCCAGCTACTGCTTATGCATTCGACAGAGTGTTTGGACCGCATACAAATTCTGATGAGGTGTATGAGGTAGCAGCCAAACCTGTTGTGAAGGCAGCCATGGAAGGGGTCAATGGAACAGTGTTTGCCTACGGTGTGACCAGTAGTGGAAAAACACATACGATGCATGGAGATCAAAACTCTCCTGGTATCATACCATTGGCTATAAAAGATGTTTTCAGCAGTATCCAAGATACTCCAGGAAGAGAGTTCTTACTTCGAGTGTCATATCTAGAAATATACAATGAGGTGATAAATGACTTGCTTGACCCAACTGGCCAAAATTTGCGTGTTAGAGAAGATGCACAGGGTACTTATGTGGAGGGTATAAAGGAAGAAGTTGTTTTGTCTCCTGGGCATGCTCTCTCCTTTATTGCTGCTGGAGAAGAGCATCGTCATGTTGGATCAAACAATTTTAATCTCTTCAGCAGCCGAAGTCACACAATTTTTACACTTATGATTGAAAGCAGCGTGCACGGTAAAGAATACGATGGAGTGATATTCTCTCAGCTTAATTTGATTGATCTGGCTGGATCTGAAAGCTCCAAAACCGAAACAACTGGATTAAGAAGAAAAGAAGGATCATATATAAACAAAAGTCTCCTGACACTTGGAACTGTCATTGGAAAATTGAGCGAGGGGAAATCATCTCATGTTCCCTATCGAGATTCAAAGCTTACCCGCCTCCTGCAATCGTCACTTAGTGGTCATGGTCATGTATCACTTATATGCAATGTGACCCCAGCATCCAGTAATATGGAAGAAACTCACAATACCTTGAAGTTTGCAAGCAGGGCAAAACGAGTAGAAATATATGCTTCACGTAATAAGATTATTGATGAAAAATCTCTTATTAAGAAATACCAGAGAGAAATTTCAGTTCTCAAAAGTGAACTTGATCAGCTGAAGAAGGGGATGCATCTTGGTGTCAACCATGAGGAGATTTTGACCTTAAAGCAAAAGTTAGAGGAAGGTCAAGTGAAAATGCAGTCAAGATTGGAAGAAGAGGAAGAAGAGAAGGTTGCTCTGGCAAGTAGGATCCAGAAGCTAACCAAGCTCATTCTGGTTTCATCAAAGAATGCAATTCCTGGATATATAACTGATGCTCCTGGTCACCAGCGAGGCCACTCTGTTGGCGAGGATGATAATTATGATGCCCTACAAGATGGATCTCTTTTGTTTGAAAGTGAGAGCCAAAAAGATGTTTCAACAGTGACATCTGATCTGTCTCATGATGTTAGACATAGAAGAACATCGAGTAGACGGAACGAAGAGCTCTCCCCATCTAGCAGTATCATAACTGAATCAACACAAGCTGGTGAACTGATCAGCGGAACAAGGATACCATCAGGAGGGGTGACAATGTCTGATCAGATGGATCTCCTTGTTGAGCAAGTCAAAATGCTTGCTGGAGACATTGCGTTCAGTACCAGCACTCTAAAGCGCTTGACGGAGCAGTCTGTAAATGATCCTGAAAGCTCCAGAACTCAGATTGAGAACTTGGAACAAGAAATCCAAGAAAAAAGGAAGCAAATGAGAGGTATAGAACAAAGAATAATTGAGAGTGGCGAAACTTCAGTAGCTAATACAACCCTGGTTGAAATGCAGCAGACAGTCACAAGATTGATGACTCAGTGTAATGAAAAAGCATTTGAGCTGGAGATAAAATCTGCGGACAACCGTGTCCTTCAAGAACAATTAAATAGCAAGTGCTCTGAAAACAGAGAATTGCAAGAAAAGGTGAAGTTGCTAGAGCAGCAACTAGCAACAGATTCCAGGGGTACCTCACTTTTGCCTGCTGATGAGTGTGTGTCTGGAGAGCACATTGATGAGTTGAAAAGGAAAATAAAGTACCAGGAGATTGAAAATGAAAAACTAAAGCTAGAACAAGTACAACTGTCAGAAGAGAATAGTGGATTGCATGTGCAGAATCAGAAACTCTCTGAAGAAGCTTCTTATGCCAAAGAACTGGCCTCAGCTGCTGCTGTGGAGTTGAACAGTTTGGCTGGGGAGGTAACCAAACTTTCATTGCAGAACGCGAAGTTTGAAAAAGAATTGATGGCTGCTCGAAACCTGGCCAACACTCGAAGTGCTGTCACACAGACAGTTAATGGTGTTCATCGCAAGTACAATGATCAAAGATCTGGAAGGAAGGGTAGAATTTCTAGCCGTGCAAATGAAAATTTGGGAGCTGGTAGAGATGAGTTGGAGTCATGGAGTCTCGAAGTTGAAGATCTGAAGATGGAACTTCAGGCTAGGAAACAACGAGAAGCAGTTCTTGAGACTGCATTGGCCGAAAAGGAAATTATGGAAGAGGAGTACAGGAACAGGGTTGAAGAGGCCAAGAAAAGGGAATCTTCGTTGGAGAATGATTTAGCAAATATGTGGGTCCTCGTTGCGAAGTTAAAGAGAGAAGCGGGTGTTGTCACAGAATCAAACATTGACAAAAAATCTGCTGATGGGGACACACATACGAATGATCCGAAAAGTAATGACATTGAAAGTAATATTATCTCTAGGGAGCAGATTTTGGATGTATCAAAACTGGACAACGAAACTCCCAAGGAAGAACCTTTAGTTGTTCATCTAAAGGCACGAATGCAAGACATGAAGGAAAAAGAACTCAAGCATCTTGGTAATGGAGATGCAAATTCCCATGTTTGTAAAGTGTGCTTTGAATCTTCAACTGCAGCAATGCTTCTTCCATGCCGTCATTTCTGTTTGTGTAAATCTTGTTCACTTGCATGCTCTGAATGTCCAATATGCCGAACAAATATAGCAGATAGGCTTTTTGCTTTTACATCTTGA 3243 0.4265 MASSSRARSNSPFSHRKPVTPYSSASSFTAAKLMPRSCSSSASSFFNSGGTPEVSSRSIAPSRGGQSESTYFDAQGYGSPMEEVIAESIVSSTPRDSISVTIRFRPLSEREYQRGDEIAWYADGDKIVRNEFNPATAYAFDRVFGPHTNSDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSSIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSVHGKEYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKSSHVPYRDSKLTRLLQSSLSGHGHVSLICNVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKSELDQLKKGMHLGVNHEEILTLKQKLEEGQVKMQSRLEEEEEEKVALASRIQKLTKLILVSSKNAIPGYITDAPGHQRGHSVGEDDNYDALQDGSLLFESESQKDVSTVTSDLSHDVRHRRTSSRRNEELSPSSSIITESTQAGELISGTRIPSGGVTMSDQMDLLVEQVKMLAGDIAFSTSTLKRLTEQSVNDPESSRTQIENLEQEIQEKRKQMRGIEQRIIESGETSVANTTLVEMQQTVTRLMTQCNEKAFELEIKSADNRVLQEQLNSKCSENRELQEKVKLLEQQLATDSRGTSLLPADECVSGEHIDELKRKIKYQEIENEKLKLEQVQLSEENSGLHVQNQKLSEEASYAKELASAAAVELNSLAGEVTKLSLQNAKFEKELMAARNLANTRSAVTQTVNGVHRKYNDQRSGRKGRISSRANENLGAGRDELESWSLEVEDLKMELQARKQREAVLETALAEKEIMEEEYRNRVEEAKKRESSLENDLANMWVLVAKLKREAGVVTESNIDKKSADGDTHTNDPKSNDIESNIISREQILDVSKLDNETPKEEPLVVHLKARMQDMKEKELKHLGNGDANSHVCKVCFESSTAAMLLPCRHFCLCKSCSLACSECPICRTNIADRLFAFTS* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2368 1080 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 57 1041 - -
Tpr3g2368 1080 ProSitePatterns Kinesin motor domain signature. 314 325 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr3g2368 1080 MobiDBLite consensus disorder prediction 854 874 - -
Tpr3g2368 1080 MobiDBLite consensus disorder prediction 552 568 - -
Tpr3g2368 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 451 IPR027417 -
Tpr3g2368 1080 SUPERFAMILY RING/U-box 1032 1072 - -
Tpr3g2368 1080 Coils Coil 1080 1080 - -
Tpr3g2368 1080 Coils Coil 464 498 - -
Tpr3g2368 1080 PANTHER CENTROMERE PROTEIN E 57 1041 - -
Tpr3g2368 1080 MobiDBLite consensus disorder prediction 542 579 - -
Tpr3g2368 1080 SMART kinesin_4 95 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2368 1080 PRINTS Kinesin heavy chain signature 168 189 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2368 1080 PRINTS Kinesin heavy chain signature 282 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2368 1080 PRINTS Kinesin heavy chain signature 315 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2368 1080 PRINTS Kinesin heavy chain signature 364 385 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2368 1080 Gene3D Kinesin motor domain 89 445 IPR036961 -
Tpr3g2368 1080 Pfam Kinesin motor domain 103 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2368 1080 Pfam Zinc finger, C3HC4 type (RING finger) 1031 1072 - -
Tpr3g2368 1080 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1008 1079 IPR013083 -
Tpr3g2368 1080 MobiDBLite consensus disorder prediction 44 68 - -
Tpr3g2368 1080 MobiDBLite consensus disorder prediction 958 974 - -
Tpr3g2368 1080 MobiDBLite consensus disorder prediction 958 979 - -
Tpr3g2368 1080 ProSiteProfiles Zinc finger RING-type profile. 1033 1068 IPR001841 -
Tpr3g2368 1080 Coils Coil 636 663 - -
Tpr3g2368 1080 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g2368 1080 Coils Coil 705 739 - -
Tpr3g2368 1080 Coils Coil 810 837 - -
Tpr3g2368 1080 Coils Coil 881 936 - -
Tpr3g2368 1080 ProSiteProfiles Kinesin motor domain profile. 97 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr3g2368 1080 Coils Coil 754 781 - -
Tpr3g2368 1080 Coils Coil 423 450 - -
Tpr3g2368 1080 CDD KISc_CENP_E 97 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2368 Tpr-Chr3 22469194 22480227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2368 32 1080 Miscellaneous Gene Families AT4G39050 69.683 0.0 1439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2368 K11498 - gmx:100800460 1702.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2368 3 22469194 22480227 Tpr3g2368 3 22469194 22480227 ECH