Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2357 ATGGATCACCAAACTTTCATTCTCTCGTTTCTTTTCTTCTTCATCTTCTCCGCCTCGGCGTTTAAGCCGACGTTCTCATCGATCTCATCTACGCCCAACGGAGAAGAAGATCCATTAATTCGTCAGGTGGTCGGTGATGGAGGAGTGCGGTTGGGAGCAGAGCATCACTTTAATGAATTTAAGCATAGGTTTGGGAAGGTGTATTCTTCCAAGGAAGAACATGATTATAGGTTTTTCATATTTAAGGTTAATTTGCACCGTGCTAAGAGACATCAGAGAATGGATCCTTCAGCGGTTCATGGTATTACCAGATTCTCTGATTTGACTGGGAGGGAGTTTCGGGAGACTGTTTTGGGATTGAGAAGGGTGAAGTTGCCTTCTGATGCGAATGCCGCGCCGATTCTTCCTACCGATAATCTTCCTGCTGATTTTGATTGGAGAGAACATGGAGCGGTTACTGGTGTTAAGAATCAGGGTTCTTGTGGATCATGTTGGAGTTTCAGCACAACTGGTGCACTTGAAGGTGCTCACTTCCTATCTACCGGAAAGCTTGTCAGTCTTAGTGAGCAACAGCTTGTTGATTGTGACCATGAGTGTGATCCAGAGGAGAAGGGTTCTTGCGATGCCGGTTGCAATGGTGGATTGATGAATAGTGCTTTTGAGTATATTTTAAAATCTGGTGGGGTTATGCGAGAGGAAGACTATCCTTATTCCGGCACTGATCGTGGCGCATGCAAATTTGATAAGAAAAAGATTGCAGCATCAGTTGCAAATTTCAGTGTTGTTTCACTTGATGAAGACCAGATTGCTGCCAATCTTGTCAAAAATGGACCTCTTGCTGTTGCCATAAATGCAGTATATATGCAGACATATGTGGGTGGAGTATCATGTCCATACATATGTTCAAGAAAGCTGGATCATGGAGTCTTGTTGGTGGGGTATGGTTCCGGAGCTTATTCACCGATTAGGATGAAGGAGAAGCCGTACTGGATTATCAAAAACTCATGGGGTGAGAACTGGGGAGAAAATGGCTATTACAAGATCTGCAGAGGAAGAAACGTTTGTGGAGTGGACTCCATGGTGTCTACCGTCGCCGCTGTTCACACTACTGCTCAGTAG 1119 0.4468 MDHQTFILSFLFFFIFSASAFKPTFSSISSTPNGEEDPLIRQVVGDGGVRLGAEHHFNEFKHRFGKVYSSKEEHDYRFFIFKVNLHRAKRHQRMDPSAVHGITRFSDLTGREFRETVLGLRRVKLPSDANAAPILPTDNLPADFDWREHGAVTGVKNQGSCGSCWSFSTTGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEEKGSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGTDRGACKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYICSRKLDHGVLLVGYGSGAYSPIRMKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVAAVHTTAQ* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2357 372 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 305 315 IPR025660 -
Tpr3g2357 372 SMART pept_c1 140 365 IPR000668 GO:0006508|GO:0008234
Tpr3g2357 372 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 44 366 - -
Tpr3g2357 372 SUPERFAMILY Cysteine proteinases 54 364 IPR038765 -
Tpr3g2357 372 PRINTS Papain cysteine protease (C1) family signature 158 173 IPR000668 GO:0006508|GO:0008234
Tpr3g2357 372 PRINTS Papain cysteine protease (C1) family signature 307 317 IPR000668 GO:0006508|GO:0008234
Tpr3g2357 372 PRINTS Papain cysteine protease (C1) family signature 329 335 IPR000668 GO:0006508|GO:0008234
Tpr3g2357 372 SMART Inhibitor_I29_2 57 113 IPR013201 -
Tpr3g2357 372 CDD Peptidase_C1A 141 364 IPR039417 -
Tpr3g2357 372 Gene3D Cysteine proteinases 45 365 - -
Tpr3g2357 372 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 158 169 IPR000169 -
Tpr3g2357 372 PANTHER CYSTEINE PROTEASE RD19C-RELATED 44 366 - -
Tpr3g2357 372 Pfam Papain family cysteine protease 140 363 IPR000668 GO:0006508|GO:0008234
Tpr3g2357 372 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 329 348 IPR025661 -
Tpr3g2357 372 Pfam Cathepsin propeptide inhibitor domain (I29) 57 113 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2357 Tpr-Chr3 22331680 22333643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2357 K01373 - gmx:100791283 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2357 3 22331680 22333643 Tpr3g2357 3 22331680 22333643 ECH