Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2349 ATGCTTCTTCTGTTTCAAACAACCGCTGGTGGGTATGCAATTTTCAAAGTACTTGATGAGGACTTACAGAACGTGTTTTCCGGTTCAAATCCTGCTAGAATGGCGTTCGAGTTGAAGGCATTTTCCAAATTTAACACTATTTCAAAAACTACACCGGAAACTACTTTGCCGATCAGTAATAGACAATTTAGAAAGCATCTGCGCAAGTTTCTACGTGTTCATTGTGCAAATGAAACGTTAGGTGTAGCCGATTCAAAGCTTGCGAATATCATTAAGGATAAATTGAAAATTGACTGTGTTCACAACAATGATGTTATGGAGTTGATGAGAGGTGTTAGAAATCAACTGACTGAATTAGTAGTATGTCTAGCTTCTCAAGACATGGCCCCTATGAGCTTAGGTTTGTCTCATAGATTATCCAAATACAAGAACAAGTTTAGTACTCACAAGCTGGATACTATCATCATCCAAGCGATCGGCTTACTTGGTGACATTGATATAGAGCTGAACAGAATTGCCGGGAGGCTTCGCAAACAGTATAGTAAGCATTTTCCAGAACTTACCAAAATCACAATGGACAACAACCAATATGCAAGGACAGTCAAGATGATGTGTGAATGCATTAATGTTGCAAAACTTCATTTCTCTAAGATTTTGTCAGAGGAAGTTGAGATTGAGAAAGAGCTGAAAGAAGCATCTATTATATCCATGGGAACAGAAATTGGTGAGGTTAGATTGGGAAAAATTAGTATGCTTTGTGATGAAGTTTTATGTCTATTAGAATACAGGGCTACACCGTATGATTGTCTCAAGAGTAGGATCAACGCCATTGCACCCGATTTGATAGCTATGGTTGAGGAGATTGTTGGCGCCCGCCTAATTTCACGAAATAGCAAAACAATCACTAAATCTTCTCCACGTCTACCAAATGCTGCATCTCAACGTCAAGTCCAGACATTAAACATGATTATGACGTTGTTTAAACGCTGA 990 0.3869 MLLLFQTTAGGYAIFKVLDEDLQNVFSGSNPARMAFELKAFSKFNTISKTTPETTLPISNRQFRKHLRKFLRVHCANETLGVADSKLANIIKDKLKIDCVHNNDVMELMRGVRNQLTELVVCLASQDMAPMSLGLSHRLSKYKNKFSTHKLDTIIIQAIGLLGDIDIELNRIAGRLRKQYSKHFPELTKITMDNNQYARTVKMMCECINVAKLHFSKILSEEVEIEKELKEASIISMGTEIGEVRLGKISMLCDEVLCLLEYRATPYDCLKSRINAIAPDLIAMVEEIVGARLISRNSKTITKSSPRLPNAASQRQVQTLNMIMTLFKR* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2349 329 Pfam snoRNA binding domain, fibrillarin 162 296 IPR002687 -
Tpr3g2349 329 SUPERFAMILY Nop domain 148 296 IPR036070 -
Tpr3g2349 329 SMART NOSIC_2 154 206 IPR012976 -
Tpr3g2349 329 Gene3D - 124 281 - -
Tpr3g2349 329 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 297 IPR045056 GO:0030515|GO:0031428|GO:0032040
Tpr3g2349 329 PANTHER PROTEIN NOP56, PUTATIVE-RELATED 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2349 Tpr-Chr3 22277673 22279753 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2349 K14565 - gmx:100784721 343.584