Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2318 ATGGTGTCTACTTGTGTGAACTTTAAGGCTAATACCCATATAGCAAATTTGAAGAAAGACAATATTTTTCGTCAAGATAATGGTTTTCTAGGTGAGAGAATCAAAGGGGGTGTGAATTATAGTCCATGGATCATTAATGATCAGTTGGGAATAAGTTTGAGAACTAAGGAAAGGGTTAAGAAGCACAAACCTGGTGTTGTATCTGCTGTTCTTACATCAAATAATGCCAATGAGACTGTGACCTTTCAGGTTCCATCTTTTTTGAGAAGAAAAGCTGACCCTAAAAATGTTGCTTCCATCATATTGGGAGGAGGTCCTGGTGTTCACCTTTTTCCTCTTACCAAAAGAGCTGCTACACCTGCTGTACCTGTTGGTGGATGTTACAGGCTTATAGATATTCCAATGAGCAACTGCATCAACAGTGGCATCAACAAAATATTTGTATTGACACAGTTCAACTCAGCATCACTAAACCGTCACATCGCTCGCACTTATTTTGGAAATGGCATCAACTTTGGGGATGGATATGTTGAGGTTCTGGCGGCTACTCAAACACCAGGAGAAGCTGGGAAGAATTGGTTTCAAGGAACAGCAGATGCTGTGAGGCAATTTACATGGGTTTTTGAGGATGCCAAGAACACTAACATTGAGAATGTAGTAATCTTGGCTGGTGATCATCTATACAGAATGGATTACATGGACCTTGTGCAGAGTCACATTGACAGAAATGCAGATATTACAGTATCATGTGCTGCCGTAGGCGACAGCCGTGCATCGGATTATGGATTAGTCAAGGTAGATAGCAGAGGTCGCATCGTCCAATTTTCAGAGAAACCTAAGGGAGGTGATCTTAAAGCAATGCAAGTAGATACCTCTCTTTTCGGATTGTCGCCCCAAGATGCATTAAGGTCGCCATATATTGCATCTATGGGAGTTTATGTATTCAAGACTGATGTTTTACTCAAGCTACTGAAATGGAGGTATCCCACATCCAATGACTTCGGATCTGAAATCATTCCAGCATCTGTTAAGGAACATAATGTCCAAGCATTTTTCTTCGGAGACTATTGGGAAGATATTGGAACAATAAAATCATTTTATGATGCTAACATGGCTCTTACTGAAGAGAGTCCAATGTTCAAATTTTATGATCCCAAGACACCCATTTTCACATCTCCGGGATTCTTACCACCGACAAAGATTGATAAATGCAGGATTGTGGATGCAATAATCTCGCATGGCTGTTTCCTAAGAGAATGTAGTGTGCAACATTCCATTGTGGGTGAACGTTCACGATTGGATTACAGCGTTGAGCTCCAGGACACTATAATGATGGGAGCAGACTATTACCAAACTGAATCTGAAATTGCTTCTGAGCTGGCAGAGGGAAAGGTTCCGATTGGGATTGGAAGGAACAGCAAAATCAGGAATTGTATAATTGACAAGAATGCTAGGATTGGGAAAGATGTCATCATCATGAACAAAGATGGTGTTCAAGAAGGAGATAGACCGGAAGATGGATTTTACATCCGATCAGGAATCACAATCGTAATGGAGAAGGCCACAATAGAAGATGGCACTGTCATATAA 1590 0.4088 MVSTCVNFKANTHIANLKKDNIFRQDNGFLGERIKGGVNYSPWIINDQLGISLRTKERVKKHKPGVVSAVLTSNNANETVTFQVPSFLRRKADPKNVASIILGGGPGVHLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHIARTYFGNGINFGDGYVEVLAATQTPGEAGKNWFQGTADAVRQFTWVFEDAKNTNIENVVILAGDHLYRMDYMDLVQSHIDRNADITVSCAAVGDSRASDYGLVKVDSRGRIVQFSEKPKGGDLKAMQVDTSLFGLSPQDALRSPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPASVKEHNVQAFFFGDYWEDIGTIKSFYDANMALTEESPMFKFYDPKTPIFTSPGFLPPTKIDKCRIVDAIISHGCFLRECSVQHSIVGERSRLDYSVELQDTIMMGADYYQTESEIASELAEGKVPIGIGRNSKIRNCIIDKNARIGKDVIIMNKDGVQEGDRPEDGFYIRSGITIVMEKATIEDGTVI* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2318 529 Pfam Nucleotidyl transferase 99 375 IPR005835 GO:0009058|GO:0016779
Tpr3g2318 529 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 529 IPR011831 GO:0005978|GO:0008878
Tpr3g2318 529 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE 1 529 - -
Tpr3g2318 529 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 98 493 IPR011831 GO:0005978|GO:0008878
Tpr3g2318 529 SUPERFAMILY Trimeric LpxA-like enzymes 392 529 IPR011004 -
Tpr3g2318 529 CDD LbH_G1P_AT_C 397 523 - -
Tpr3g2318 529 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 308 318 IPR005836 GO:0005978|GO:0008878
Tpr3g2318 529 Gene3D Hexapeptide repeat proteins 395 529 - -
Tpr3g2318 529 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 193 201 IPR005836 GO:0005978|GO:0008878
Tpr3g2318 529 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 490 IPR029044 -
Tpr3g2318 529 CDD ADP_Glucose_PP 100 360 - -
Tpr3g2318 529 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 83 394 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2318 Tpr-Chr3 22000684 22005715 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2318 K00975 - gmx:100808791 956.822
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2318 3 22000684 22005715 Tpr3g2318 3 22000684 22005715 ECH