Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2316 ATGGAGGGAACTGGAGGCAGCAGTGCCTCTGCTACTGCTGCTGCTGGACCACCTGTGAACCAATGGGTTCAGGAATTTTCGAAGCTATTTCAGCATTATTTGGATAAATCTACTCCGCACTCGACGTATAGATGGATTGGAACTTTTGTCATTGCTTCGATATATGTTTTAAGGGTTTTTTATATTCAAGGATTTTACATTGTGTCTTATGGATTGGGAATCTACATGCTGAATCTGTTGATTGGGTTTCTGTCACCTTTGGTTGATCCTGAACTTGAGCCTTCTGAGGGAGGACCTTTGCTACCAACTAAAGGATCTGATGAGTTCAAGCCGTTCATTCGTCGGCTTCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCATTCTTGATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCAATATTACTCTGTTACTGGGTTGTTCTGTTTGTCCTGACAATGAGGCGCCAAATCGCACACATGATCAAATACAGATATATTCCATTCAGTTTGGGAAAACAGAAGTACGGTGGCAAAAAATCTTATGGAAGTAGCAGCGGTGGCTCTCGTGCAGACTGA 603 0.4229 MEGTGGSSASATAAAGPPVNQWVQEFSKLFQHYLDKSTPHSTYRWIGTFVIASIYVLRVFYIQGFYIVSYGLGIYMLNLLIGFLSPLVDPELEPSEGGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYRYIPFSLGKQKYGGKKSYGSSSGGSRAD* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2316 200 PANTHER PROTEIN RER1A 11 194 - -
Tpr3g2316 200 PANTHER PROTEIN RER1 11 194 IPR004932 GO:0016021
Tpr3g2316 200 Pfam Rer1 family 22 185 IPR004932 GO:0016021
Tpr3g2316 200 PIRSF AtER_Rer1p 5 195 IPR004932 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2316 Tpr-Chr3 21987911 21990967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2316 1 200 Miscellaneous Gene Families AT2G21600 76.000 1.06e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2316 - - mnt:21401534 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2316 3 21987911 21990967 Tpr3g2316 3 21987911 21990967 ECH