Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2315 ATGGGGAAAGCAAAAGCAAAGGGAAAACATCGTTTAGACAAATACTATCACTTAGCCAAAGAACACGGTTACAGATCTCGAGCATCATGGAAACTCGTTCAAATCAATTCAAAGTACCATTTTCTCGAATCAGCACGTTACGTTCTCGATCTCTGTGCCGCTCCCGGAGGTTGGATGCAAGTTGCTGTTGAACGTGTTCCCGTCCAACATCTCGTTATCGGAGTTGACCTTGCTCCAATTGCTCCCATCCGTGGCGCTATTGCTATTCAAGAAGATATCACCAGACCTGAATGTAAGTCACGTGTTAAGAAAATCATGAAGGAAAACGATTGTCGTGCTTTTGATGTTATTCTTCATGATGGTTCTCCGAATGTTGGTGGTGCTTGGGCTCAAGAAGCTACTAGTCAAAATGCTCTTGTTATTGATGCTGTTAAATTGGCTACACAGCTTTTAGCACCTAAGGGTACTTTTGTTACCAAGATTTTCAGGTCCCAGGATTACAATTCTGTTATTTACTGTATGAAGCAGTTGTTTGAGAAGGTTGAGGTGGATAAACCGGCAGCTAGTCGTTCTGAATCTGCTGAGATATATATTTTGGGGCTTAAGTATTTGGCCCCTGCTAAGATTGATCCTCGCATTCTCGATATCAAGTATCTTTTTCAGGCATCTGCTCAACCGGAAGCTAGGGTGGTGGATGTACTTAGAGACAATAATAAACAAAAGAGGCATCGTGATGGGTATGAAGATGGAAACACAACTTTGAGGAAGGTTTCTTCAGCTGCAAATTTTATTTGGTCCGATGCTCCTCTGGAGATTCTTGGTTCAGTTACTTCCATAAGCTTTACTGATCCTGCTGATTTACCAATAAAGGATCATGATCTTACTACTGAAGAGATAAAAACTCTCTGTGAAGATTTGAGGGTTTTGGGGAAGCAAGATTTCAAGCATCTTCTAAAGTGGCGGATTCACATAAGAAAAGCTCTTTCACCTGCTAAGAAGACCGAACCTGCTACGACAGCTGAGGTGGAAAATGAGCATGTGGTGGATGAAGATGATAAATTACTCAATGAGATGGAGGAACTGTCAAATGCATTGGAACGCAAGAAAAAACGTGAAAAAAAGATTTTAGCAAAAAGAAGAGCTAAGGACAAGGCACGAAAAGCAACAGGGATGCAAATGGATGCAGTAGAAGATGGTTATGTTGATCACGAGTTGTTTTCTCTTGCCTCCATAAAGGGTAAGAAGGATCTGGTAGCTGTTGACACCACTGACTATGAAGGTGGTGAGGGTGAAGTGGATGACAGTGAGAATGAAGAAAACAAAGGTGGCTTGGAGCATTCATCTAGTGACTTAGATTCTGATGAAGAACGTAAAAGATATGATGAACAAATGGATGATTTCCTTGAACAAGCTTATGAAAAGTTTGTGATAAAAAGGGAAGGGACTGCAATGCAGCGGAAGCGTATTAAGAAATCCTATGATGCAGACTCCCAGCTTTTGGAGGAGGCTGGTGAGGACGAGGACATTGTTCAGTCAAAATATGATTCAGATGAAGATCAGGATCTTCAAGAAGCCAATCCTTTGATGGTGCCACTTAATGACGGGGCAGGGCCCACCCAAGAGGAGATCACAAATATGTGGTTTAATCAGGATGTCTTTGCTGAAGCTGTAAAGGAAGGAGGCTTTGAGAAGGATGATAGCGAAAATGAGATGGATATTGATGGACTGAAGGAGAAGACGCCAGTTGCTAAAAAGGTCAAAGAAAATAAGCCTGTTGCTGAGAAGGTCAAAGAAAATAAGCCTGTTGCTGAGAAGGTCAAAGAAAATAAGCCTGTTGCTGATAAGATCAAACTAAATAATACGGCTGCTTCTATGGAGATAGATCACACTAAATCTCAAGCATCTAAGGAAATGGATTTTGAGATTGTTCCTGCACCTGCCACTGATTCAGATGATTCGTCTTCTGATGAGTCAGAGGACGATGTTGAAAATAAAGCTGAGATATTGGCTTATGCTAAGAAGATGCTTAGGAAAAAGCAAAGGGAACAAATGCTGGATGATGCATATAACAAGTACATGTTTAACGATGAGGGATTGCCCAAATGGTTTTTAGATGAGGAAAGGAAACACCGTGTTCCAGTCAAGCCTGTCACGAAAGAGGAAATTGCTGCAATGAAAGCACAATTTAAAGATATTGATGCTCGCCCTGCAAAGAAGGTGGCTGAGGCCAAAGCACGAAAGAAGCGTGTTGCAATGAGGAAGCTTGAGAAGGTACGTAAGAAGGCCAATGCTATATCAGACCAGCCAGACATATCCGATCGTTCAAAGAGTAAGCAAATTGATCGACTTTATAAAAATGCTGTTCCGAAAAGGCCTAAAAAGGAGTATGTAGTTGCAAAGAAAGGTGTCCAAGTTAAGACCGGCCCGGGAAAAGTCCTTGTTGATCGTAGGATGAAGAAGGATTTGAGGAAAAGTGGATCGGGTAAGGCAGGAAAAAGAGGTTCCAAGGCAAAGGGGGGCAAGTCTCCAAAGGGTGGGAAGGCTCCAAAGGGTAAGGCGCCGAAGGGCCAAGGATCTTCAAATTTCTCTGCCAAGAAAGGAAGAAAATAA 2610 0.4215 MGKAKAKGKHRLDKYYHLAKEHGYRSRASWKLVQINSKYHFLESARYVLDLCAAPGGWMQVAVERVPVQHLVIGVDLAPIAPIRGAIAIQEDITRPECKSRVKKIMKENDCRAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQLLAPKGTFVTKIFRSQDYNSVIYCMKQLFEKVEVDKPAASRSESAEIYILGLKYLAPAKIDPRILDIKYLFQASAQPEARVVDVLRDNNKQKRHRDGYEDGNTTLRKVSSAANFIWSDAPLEILGSVTSISFTDPADLPIKDHDLTTEEIKTLCEDLRVLGKQDFKHLLKWRIHIRKALSPAKKTEPATTAEVENEHVVDEDDKLLNEMEELSNALERKKKREKKILAKRRAKDKARKATGMQMDAVEDGYVDHELFSLASIKGKKDLVAVDTTDYEGGEGEVDDSENEENKGGLEHSSSDLDSDEERKRYDEQMDDFLEQAYEKFVIKREGTAMQRKRIKKSYDADSQLLEEAGEDEDIVQSKYDSDEDQDLQEANPLMVPLNDGAGPTQEEITNMWFNQDVFAEAVKEGGFEKDDSENEMDIDGLKEKTPVAKKVKENKPVAEKVKENKPVAEKVKENKPVADKIKLNNTAASMEIDHTKSQASKEMDFEIVPAPATDSDDSSSDESEDDVENKAEILAYAKKMLRKKQREQMLDDAYNKYMFNDEGLPKWFLDEERKHRVPVKPVTKEEIAAMKAQFKDIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQPDISDRSKSKQIDRLYKNAVPKRPKKEYVVAKKGVQVKTGPGKVLVDRRMKKDLRKSGSGKAGKRGSKAKGGKSPKGGKAPKGKAPKGQGSSNFSAKKGRK* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2315 869 MobiDBLite consensus disorder prediction 482 520 - -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 812 828 - -
Tpr3g2315 869 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 IPR015507 GO:0001510|GO:0008168
Tpr3g2315 869 MobiDBLite consensus disorder prediction 437 462 - -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 482 498 - -
Tpr3g2315 869 PANTHER RRNA METHYLTRANSFERASE-RELATED 5 835 - -
Tpr3g2315 869 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 835 - -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 506 520 - -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 624 664 - -
Tpr3g2315 869 Pfam Spb1 C-terminal domain 635 825 IPR012920 GO:0005634|GO:0006364|GO:0008168
Tpr3g2315 869 Pfam Domain of unknown function (DUF3381) 238 386 IPR024576 -
Tpr3g2315 869 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 832 IPR028589 GO:0008649|GO:0031167
Tpr3g2315 869 CDD AdoMet_MTases 48 163 - -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 425 462 - -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 751 869 - -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 757 800 - -
Tpr3g2315 869 Coils Coil 348 378 - -
Tpr3g2315 869 Pfam FtsJ-like methyltransferase 24 202 IPR002877 GO:0008168|GO:0032259
Tpr3g2315 869 Gene3D Vaccinia Virus protein VP39 21 209 IPR029063 -
Tpr3g2315 869 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 203 IPR029063 -
Tpr3g2315 869 MobiDBLite consensus disorder prediction 829 845 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2315 K14857 - gmx:100790741 1209.13