Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2313 ATGGCTGTAGGAGCAACTACTACAAAGATTCTGGTAATCGGAGGAACTGGTTACATGGGAAAGTTCATAGTTGAAGCTAGCATTAAAGCTGGTTATCCCACTTTTGCTCTTGTAAGAGAATCGACTCTTTCTAATCCAAACAAATCATCCATCATCCACAACTTCAACACATTGGGCGTCAACATTGTTTTGGGTGATATAAACGACCAACATAGTTTGGTTAAGGTCATAAAGCAAGTGGACGTTGTAATCTCAACAGTGAGCCACGATCAATTATCTGATCAATATAAGATCCTTGCCGCTATTAAAAAAGCTGGAAATATAAAGAGGTTTTTTCCTTCTGAGTTTGGAAATGATGTGGACCAAAATCATGGATTGGATGAGGGAAAGGTTGTGTTTGACACTAAGACCAAATATCGTAGAGCCATTGAGGCAGAAGGAATTCCCCATACGTATGTGGTGGCAAATTTTCTCACTCAACACTTCCTTCCAACTTGGTCACAACTTATGGACTCAGCTTCTCCATTAGATGAAGTTATTATCCTTGGGGATGGAAATATCAAATCCATTTTCAATACTGAAGAGAGTGTTGCGACTTTCACTATTAGAACAGTTGATGATCCAAGAACTTTGAACAAAACTCTCTATATTAGACCTTCCACGAACACCTTGTCATACAATGACCTAGTATCTCTTTGGGAGAAGAAGACAAGTAATACCCTTAAAAGAATCTATGTTTCGGAGGAGCAAGCAGTGAAGATGATGCAAGAGTCACCATATCCTTTAATAAAGATGGGCTTTGCAATTTGTCTGGCTGCATTTGTGAAAGGAGATCACACTAACTATGAAATTGAACCCTCAATTGGAGTAGAAGCTTCAAAACTTTATCCTGATGTCAAATACACCACTTTGGATGAGTACTTTGAGGAAAATCATGATCGCACTCCATTTTACTTAAATTGGTTAATATCAATTAACAATGAGCAACATTTTAATTAG 999 0.3784 MAVGATTTKILVIGGTGYMGKFIVEASIKAGYPTFALVRESTLSNPNKSSIIHNFNTLGVNIVLGDINDQHSLVKVIKQVDVVISTVSHDQLSDQYKILAAIKKAGNIKRFFPSEFGNDVDQNHGLDEGKVVFDTKTKYRRAIEAEGIPHTYVVANFLTQHFLPTWSQLMDSASPLDEVIILGDGNIKSIFNTEESVATFTIRTVDDPRTLNKTLYIRPSTNTLSYNDLVSLWEKKTSNTLKRIYVSEEQAVKMMQESPYPLIKMGFAICLAAFVKGDHTNYEIEPSIGVEASKLYPDVKYTTLDEYFEENHDRTPFYLNWLISINNEQHFN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2313 332 Gene3D - 9 298 - -
Tpr3g2313 332 CDD PCBER_SDR_a 9 307 IPR045312 GO:0016491
Tpr3g2313 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 266 IPR036291 -
Tpr3g2313 332 Gene3D - 157 308 - -
Tpr3g2313 332 PANTHER PINORESINOL REDUCTASE-RELATED 6 309 - -
Tpr3g2313 332 Pfam NmrA-like family 10 275 IPR008030 -
Tpr3g2313 332 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 6 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2313 Tpr-Chr3 21969466 21971839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2313 K23050 K13266 pvu:PHAVU_011G044500g 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2313 3 21969466 21971839 Tpr3g2313 3 21969466 21971839 ECH