Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g2310 ATGAGTACTGATAGTGAAGAACGAGTTCCGATCCACACAAATCATCGTCGATTACCAGATTTTCTCCAAACCGTAAATCTGAAATACGTTAAACTAGGTTACCATTACCTAATCACACATCTATTAACACTATGCTTAATCCCTCTTATGTCAGTAATCATAATCCAAGTTTCTCAAATGAATCCAAACGATATTCACCAACTTTGGCTTCATCTTAAATACAATCTCGTAAGTGTCATTACTTGTTCCACTTTTCTTGTTTTCGGATCCACCGTTTACATCATGACCCGACCCAGATCCATTTACTTGATCGATTTTTCTTGTTATAAACCACCTTCAAATCTTTCTGTTAAATTCACTAAATTCATTCAACATTCAAAACTCAAAGGTGATTTCGATGAATCTAGTTTGGAATTTCAGCGGAAGATTCTAGAACGTTCTGGTCTTGGTGAACAAACTTATTTACCTGAAGCTATGCATAAGATTCCACCAACACCTTCTATGGCTTCTGCTAGAGAAGAAGCTGAACAGGTTATGTATGGTGCTTTAGATAATCTTTTTGCTAATACCAAAATTAAGCCTAAAGAAATTGGTATTCTTGTTGTTAATTGTAGTTTGTTTAATCCAACACCTTCACTTTCAGCTATGATTGTTAACAAGTATAAATTACGCGGTAACATTCGTAGTTTTAATCTCGGTGGTATGGGTTGTAGTGCTGGTGTTATAGCAATTGATCTTGCTAAAGACATGCTTCAAGTTCATAGGAATACTTATGCTGTTGTTGTAAGCACTGAGAATATTACTCAGAATTGGTATTTTGGTAATAAGAAATCTATGTTGATACCTAATTGTTTGTTTCGTGTTGGTGGCGCCGCTGTTTTGCTTTCGAACAAAGGATGTGATAAAAGAAAAGCTAAGTATAAGCTAGTGCATGTTGTGAGAACACATAAAGGTGCTGATGATAAAGCATTTAAATGTGTTTATCAAGAACAAGACGATGTCGGTAAAACTGGCGTATCTTTGTCCAAAGATCTTATGGCCATTGCTGGCGGAGCTCTTAAGACTAATATAACAACTTTGGGTCCTCTTGTTTTACCTGTTAGTGAACAGCTTTTGTTTTTTACTACTTTGGTTGTTAAGAAGCTGTTTAATGCAAAAGCTAAACCTTATATACCTGATTTTAAGTTAGCTTTTGAGCATTTTTGTATACATGCTGGTGGTAGAGCTGTGATTGATGAACTTGAGAAAAATTTACAGCTTTTGCCTAGTCATGTTGAGGCATCTAGAATGACTTTGCATAGATTTGGGAACACTTCATCAAGTTCAATTTGGTATGAGTTAGCTTACATAGAAGCTAAAGGGAGAATGAGAAAGGGTAACCGAATTTGGCAGATAGCATTTGGGAGTGGTTTTAAATGTAACAGTGCTGTTTGGCAAGCTATGAAACATGTGAAAGCTTCACCTATGAGTCCATGGGAAGATTGCATCGATAGGTACCCTGTTGAGATTGTTACATAG 1518 0.361 MSTDSEERVPIHTNHRRLPDFLQTVNLKYVKLGYHYLITHLLTLCLIPLMSVIIIQVSQMNPNDIHQLWLHLKYNLVSVITCSTFLVFGSTVYIMTRPRSIYLIDFSCYKPPSNLSVKFTKFIQHSKLKGDFDESSLEFQRKILERSGLGEQTYLPEAMHKIPPTPSMASAREEAEQVMYGALDNLFANTKIKPKEIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGAAVLLSNKGCDKRKAKYKLVHVVRTHKGADDKAFKCVYQEQDDVGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPVSEQLLFFTTLVVKKLFNAKAKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLLPSHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRIWQIAFGSGFKCNSAVWQAMKHVKASPMSPWEDCIDRYPVEIVT* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g2310 505 CDD CHS_like 83 478 - -
Tpr3g2310 505 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 399 479 IPR013747 -
Tpr3g2310 505 PANTHER 3-KETOACYL-COA SYNTHASE 10 504 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tpr3g2310 505 Gene3D - 105 480 IPR016039 GO:0016746
Tpr3g2310 505 PANTHER 3-KETOACYL-COA SYNTHASE 4 10 504 - -
Tpr3g2310 505 SUPERFAMILY Thiolase-like 87 302 IPR016039 GO:0016746
Tpr3g2310 505 SUPERFAMILY Thiolase-like 310 479 IPR016039 GO:0016746
Tpr3g2310 505 PIRSF Very_long_ch_3-ktacl-CoA_syn 20 505 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tpr3g2310 505 Pfam FAE1/Type III polyketide synthase-like protein 93 382 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g2310 Tpr-Chr3 21882261 21884422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g2310 16 503 Miscellaneous Gene Families AT1G19440 82.582 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g2310 K15397 - vvi:100853861 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g2310 3 21882261 21884422 Tpr3g2310 3 21882261 21884422 ECH